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新种加利亚金色单胞菌和新种假加利亚金色单胞菌,从猪殃殃叶际分离得到。

Aureimonas galii sp. nov. and Aureimonas pseudogalii sp. nov. isolated from the phyllosphere of Galium album.

作者信息

Aydogan Ebru L, Busse Hans-Jürgen, Moser Gerald, Müller Christoph, Kämpfer Peter, Glaeser Stefanie P

机构信息

Institut für Angewandte Mikrobiologie, Justus-Liebig-Universität Giessen, D-35392 Giessen, Germany.

Institut für Bakteriologie, Mykologie und Hygiene, Veterinärmedizinische Universität Wien, A-1210 Wien, Austria.

出版信息

Int J Syst Evol Microbiol. 2016 Sep;66(9):3345-3354. doi: 10.1099/ijsem.0.001200. Epub 2016 Jun 2.

Abstract

Four yellow-pigmented, Gram-stain-negative, rod-shaped bacteria, strains PP-WC-4G-234T, PP-CE-2G-454T, PP-WC-1G-202 and PP-CC-3G-650, were isolated from the phyllosphere of Galium album. The strains shared 99.7-100 % 16S rRNA gene sequence similarity but could be differentiated by genomic fingerprinting using rep- and random amplification of polymorphic DNA PCRs. Phylogenetic analysis based on the 16S rRNA gene placed the strains within the family Aurantimonadaceae with highest 16S rRNA gene sequence similarity of 97.2-97.3 % to the type strain of Aureimonas phyllosphaerae. Sequence similarities to all other Aurantimonadaceae were below 97 %. The main cellular fatty acids of the strains were C18 : 1ω7c as the predominant fatty acid followed by C16 : 0 and summed feature 3 (C16 : 1ω7c/C16 : 1ω8c). The polyamine patterns of strains PP-WC-4G-234T and PP-CE-2G-454T contained sym-homospermidine as a major compound, and the major respiratory quinone was ubiquinone Q-10. Predominant polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmonomethylethanolamine, phosphatidylglycerol, phosphatidylcholine, sulfoquinovosyldiacylglycerol, three unidentified phospholipids and one unidentified lipid only detectable after total lipid staining. The DNA G+C content was 66.4, 68.9, 67.4 and 70.5 mol% for strains PP-WC-4G-234T, PP-CE-2G-454T, PP-WC-1G-202 and PP-CC-3G-650, respectively. Based on phylogenetic, chemotaxonomic and phenotypic analyses we propose two novel species of the genus Aureimonas, Aureimonas galii sp. nov. with PP-WC-4G-234T (=LMG 28655T=CIP 110892T) as the type strain and Aureimonas pseudogalii sp. nov. with PP-CE-2G-454T (=LMG 29411T=CCM 8665T) as the type strain and two further strains representing the same species, PP-WC-1G-202 and PP-CC-3G-650.

摘要

从猪殃殃叶际分离出4株黄色色素沉着、革兰氏染色阴性的杆状细菌,菌株PP-WC-4G-234T、PP-CE-2G-454T、PP-WC-1G-202和PP-CC-3G-650。这些菌株的16S rRNA基因序列相似度为99.7%-100%,但可通过重复序列和随机扩增多态性DNA聚合酶链式反应(PCR)进行基因组指纹分析来区分。基于16S rRNA基因的系统发育分析将这些菌株置于金色单胞菌科内,与叶际金色单胞菌模式菌株的16S rRNA基因序列相似度最高,为97.2%-97.3%。与所有其他金色单胞菌科的序列相似度均低于97%。这些菌株的主要细胞脂肪酸以C18:1ω7c为主导脂肪酸,其次是C16:0和总和特征3(C16:1ω7c/C16:1ω8c)。菌株PP-WC-4G-234T和PP-CE-2G-454T的多胺模式以对称高亚精胺为主要化合物,主要呼吸醌为泛醌Q-10。主要极性脂质为双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰单甲基乙醇胺、磷脂酰甘油、磷脂酰胆碱、磺基喹喔啉二酰甘油、三种未鉴定的磷脂和一种仅在总脂质染色后才可检测到的未鉴定脂质。菌株PP-WC-4G-234T、PP-CE-2G-454T、PP-WC-1G-202和PP-CC-3G-650的DNA G+C含量分别为66.4、68.9、67.4和70.5 mol%。基于系统发育、化学分类和表型分析,我们提出金色单胞菌属的两个新物种,以PP-WC-4G-234T(=LMG 28655T=CIP 110892T)为模式菌株的猪殃殃金色单胞菌(Aureimonas galii sp. nov.)和以PP-CE-2G-454T(=LMG 29411T=CCM 8665T)为模式菌株的假猪殃殃金色单胞菌(Aureimonas pseudogalii sp. nov.),另外两个菌株PP-WC-1G-202和PP-CC-3G-650代表同一物种。

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