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新种白色黄杆菌,从沿海沉积物中分离得到。

Marinifilum albidiflavum sp. nov., isolated from coastal sediment.

作者信息

Xu Zhen-Xing, Mu Xin, Zhang Heng-Xi, Chen Guan-Jun, Du Zong-Jun

机构信息

College of Marine Science, Shandong University at Weihai, Weihai 264209, PR China.

State Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, PR China.

出版信息

Int J Syst Evol Microbiol. 2016 Nov;66(11):4589-4593. doi: 10.1099/ijsem.0.001395. Epub 2016 Aug 5.

Abstract

A novel Gram-stain-negative, facultatively anaerobic, filamentous, and yellowish-white-pigmented marine bacterium, designated strain FB208T, was isolated from marine sediment obtained off the coastal area of Weihai, China. Cells of strain FB208T were filamentous during exponential growth, fragmented to rods in the stationary growth phase and became spherical in aged cultures. It grew optimally at 33 °C, at pH 7.0-7.5 and in the presence of 2.0-3.0 % (w/v) NaCl. Based on the 16S rRNA gene sequence, strain FB208T was found to be closely related to Marinifilum flexuosum DSM 21950T (96.9 % similarity) and Marinifilum fragile JCM 15579T (96.4 %), with less than 90.0 % sequence similarity to other genera of the class Bacteroidia. Phylogenetic analysis, also based on 16S rRNA gene sequences, placed strain FB208T in the genus Marinifilum, family Marinifilaceae. The predominant isoprenoid quinone of strain FB208T was identified as menaquinone MK-7. The main cellular fatty acids were iso-C15 : 0, iso-C17 : 0 3-OH and iso-C17 : 1ω9c, and the major polar lipids were an unidentified lipid and aminophospholipid. The G+C content of the genomic DNA was 43.8 mol%. Based on these phylogenetic and phenotypic data, strain FB208T represents a novel species of the genus Marinifilum, for which the name Marinifilum albidiflavum sp. nov. is proposed. The type strain is FB208T (=KCTC 42591T=MCCC 1H00113T).

摘要

从中国威海沿海地区采集的海洋沉积物中分离出一株新型革兰氏阴性、兼性厌氧、丝状且呈黄白色色素的海洋细菌,命名为FB208T菌株。FB208T菌株的细胞在指数生长期呈丝状,在稳定生长期破碎成杆状,在老化培养物中变为球形。其最适生长温度为33 °C,pH值为7.0 - 7.5,NaCl浓度为2.0 - 3.0%(w/v)。基于16S rRNA基因序列,发现FB208T菌株与弯曲海丝菌DSM 21950T(相似度96.9%)和脆弱海丝菌JCM 15579T(相似度96.4%)密切相关,与拟杆菌纲的其他属序列相似度低于90.0%。基于16S rRNA基因序列的系统发育分析将FB208T菌株归入海丝菌属,海丝菌科。FB208T菌株的主要类异戊二烯醌被鉴定为甲基萘醌MK - 7。主要细胞脂肪酸为异C15 : 0、异C17 : 0 3 - OH和异C17 : 1ω9c,主要极性脂为一种未鉴定的脂类和氨基磷脂。基因组DNA的G + C含量为43.8 mol%。基于这些系统发育和表型数据,FB208T菌株代表海丝菌属的一个新物种,为此提出新名称白黄海丝菌(Marinifilum albidiflavum sp. nov.)。模式菌株为FB208T(=KCTC 42591T = MCCC 1H00113T)。

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