一株促进植物生长且产生冷活性酶的嗜冷节杆菌敏捷亚种L77的首个高质量基因组草图序列。
First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77.
作者信息
Singh Ram N, Gaba Sonam, Yadav Ajar N, Gaur Prakhar, Gulati Sneha, Kaushik Rajeev, Saxena Anil K
机构信息
Division of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India.
Division of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India ; Present Address: ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Mau, 275103 Uttar Pradesh India.
出版信息
Stand Genomic Sci. 2016 Aug 26;11(1):54. doi: 10.1186/s40793-016-0176-4. eCollection 2016.
Arthrobacter agilis strain L77, is a plant growth promoting and cold active hydrolytic enzymes producing psychrotrophic bacterium, isolated from Pangong Lake, a subglacial lake in north western Himalayas, India. Genome analysis revealed metabolic versatility with genes involved in metabolism and cold shock adaptation, utilization and biosynthesis of diverse structural and storage polysaccharides such as plant based carbon polymers. The genome of Arthrobacter agilis strain L77 consists of 3,608,439 bp (3.60 Mb) of a circular chromosome. The genome comprises of 3316 protein coding genes and 74 RNA genes, 725 hypothetical proteins, 25 pseudo-genes and 1404 unique genes.
敏捷节杆菌L77菌株是一种促进植物生长且能产生冷活性水解酶的嗜冷细菌，从印度喜马拉雅山脉西北部的冰川下湖泊班公湖分离得到。基因组分析显示其具有代谢多样性，包含参与代谢和冷休克适应的基因，以及多种结构和储存多糖（如植物碳聚合物）的利用和生物合成相关基因。敏捷节杆菌L77菌株的基因组由一条3,608,439 bp（3.60 Mb）的环状染色体组成。该基因组包含3316个蛋白质编码基因、74个RNA基因、725个假定蛋白、25个假基因和1404个独特基因。
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