Heale Bret S E, Overby Casey Lynnette, Del Fiol Guilherme, Rubinstein Wendy S, Maglott Donna R, Nelson Tristan H, Milosavljevic Aleksandar, Martin Christa L, Goehringer Scott R, Freimuth Robert, Williams Marc S
Bret S.E. Heale, Ph.D., 421 Wakara Way #140, Salt Lake City, UT 84108, Email:
Appl Clin Inform. 2016 Aug 31;7(3):817-31. doi: 10.4338/ACI-2016-04-RA-0058.
The Clinical Genome Resource (ClinGen) Electronic Health Record (EHR) Workgroup aims to integrate ClinGen resources with EHRs. A promising option to enable this integration is through the Health Level Seven (HL7) Infobutton Standard. EHR systems that are certified according to the US Meaningful Use program provide HL7-compliant infobutton capabilities, which can be leveraged to support clinical decision-making in genomics.
To integrate genomic knowledge resources using the HL7 infobutton standard. Two tactics to achieve this objective were: (1) creating an HL7-compliant search interface for ClinGen, and (2) proposing guidance for genomic resources on achieving HL7 Infobutton standard accessibility and compliance.
We built a search interface utilizing OpenInfobutton, an open source reference implementation of the HL7 Infobutton standard. ClinGen resources were assessed for readiness towards HL7 compliance. Finally, based upon our experiences we provide recommendations for publishers seeking to achieve HL7 compliance.
Eight genomic resources and two sub-resources were integrated with the ClinGen search engine via OpenInfobutton and the HL7 infobutton standard. Resources we assessed have varying levels of readiness towards HL7-compliance. Furthermore, we found that adoption of standard terminologies used by EHR systems is the main gap to achieve compliance.
Genomic resources can be integrated with EHR systems via the HL7 Infobutton standard using OpenInfobutton. Full compliance of genomic resources with the Infobutton standard would further enhance interoperability with EHR systems.
临床基因组资源(ClinGen)电子健康记录(EHR)工作组旨在将ClinGen资源与电子健康记录整合。实现这种整合的一个有前景的选择是通过健康级别七(HL7)信息按钮标准。根据美国《有意义使用》计划认证的电子健康记录系统提供符合HL7的信息按钮功能,可利用这些功能来支持基因组学中的临床决策。
使用HL7信息按钮标准整合基因组知识资源。实现这一目标的两种策略是:(1)为ClinGen创建一个符合HL7的搜索界面,以及(2)为基因组资源实现HL7信息按钮标准可访问性和合规性提供指导。
我们利用OpenInfobutton构建了一个搜索界面,OpenInfobutton是HL7信息按钮标准的开源参考实现。评估了ClinGen资源对HL7合规性的准备情况。最后,根据我们的经验,为寻求实现HL7合规性的发布者提供建议。
八个基因组资源和两个子资源通过OpenInfobutton和HL7信息按钮标准与ClinGen搜索引擎集成。我们评估的资源对HL7合规性的准备程度各不相同。此外,我们发现采用电子健康记录系统使用的标准术语是实现合规性的主要差距。
基因组资源可以通过使用OpenInfobutton的HL7信息按钮标准与电子健康记录系统集成。基因组资源完全符合信息按钮标准将进一步增强与电子健康记录系统的互操作性。