Suppr超能文献

使用HL7信息按钮标准将基因组资源与电子健康记录整合。

Integrating Genomic Resources with Electronic Health Records using the HL7 Infobutton Standard.

作者信息

Heale Bret S E, Overby Casey Lynnette, Del Fiol Guilherme, Rubinstein Wendy S, Maglott Donna R, Nelson Tristan H, Milosavljevic Aleksandar, Martin Christa L, Goehringer Scott R, Freimuth Robert, Williams Marc S

机构信息

Bret S.E. Heale, Ph.D., 421 Wakara Way #140, Salt Lake City, UT 84108, Email:

出版信息

Appl Clin Inform. 2016 Aug 31;7(3):817-31. doi: 10.4338/ACI-2016-04-RA-0058.

Abstract

BACKGROUND

The Clinical Genome Resource (ClinGen) Electronic Health Record (EHR) Workgroup aims to integrate ClinGen resources with EHRs. A promising option to enable this integration is through the Health Level Seven (HL7) Infobutton Standard. EHR systems that are certified according to the US Meaningful Use program provide HL7-compliant infobutton capabilities, which can be leveraged to support clinical decision-making in genomics.

OBJECTIVES

To integrate genomic knowledge resources using the HL7 infobutton standard. Two tactics to achieve this objective were: (1) creating an HL7-compliant search interface for ClinGen, and (2) proposing guidance for genomic resources on achieving HL7 Infobutton standard accessibility and compliance.

METHODS

We built a search interface utilizing OpenInfobutton, an open source reference implementation of the HL7 Infobutton standard. ClinGen resources were assessed for readiness towards HL7 compliance. Finally, based upon our experiences we provide recommendations for publishers seeking to achieve HL7 compliance.

RESULTS

Eight genomic resources and two sub-resources were integrated with the ClinGen search engine via OpenInfobutton and the HL7 infobutton standard. Resources we assessed have varying levels of readiness towards HL7-compliance. Furthermore, we found that adoption of standard terminologies used by EHR systems is the main gap to achieve compliance.

CONCLUSION

Genomic resources can be integrated with EHR systems via the HL7 Infobutton standard using OpenInfobutton. Full compliance of genomic resources with the Infobutton standard would further enhance interoperability with EHR systems.

摘要

背景

临床基因组资源(ClinGen)电子健康记录(EHR)工作组旨在将ClinGen资源与电子健康记录整合。实现这种整合的一个有前景的选择是通过健康级别七(HL7)信息按钮标准。根据美国《有意义使用》计划认证的电子健康记录系统提供符合HL7的信息按钮功能,可利用这些功能来支持基因组学中的临床决策。

目的

使用HL7信息按钮标准整合基因组知识资源。实现这一目标的两种策略是:(1)为ClinGen创建一个符合HL7的搜索界面,以及(2)为基因组资源实现HL7信息按钮标准可访问性和合规性提供指导。

方法

我们利用OpenInfobutton构建了一个搜索界面,OpenInfobutton是HL7信息按钮标准的开源参考实现。评估了ClinGen资源对HL7合规性的准备情况。最后,根据我们的经验,为寻求实现HL7合规性的发布者提供建议。

结果

八个基因组资源和两个子资源通过OpenInfobutton和HL7信息按钮标准与ClinGen搜索引擎集成。我们评估的资源对HL7合规性的准备程度各不相同。此外,我们发现采用电子健康记录系统使用的标准术语是实现合规性的主要差距。

结论

基因组资源可以通过使用OpenInfobutton的HL7信息按钮标准与电子健康记录系统集成。基因组资源完全符合信息按钮标准将进一步增强与电子健康记录系统的互操作性。

相似文献

1
Integrating Genomic Resources with Electronic Health Records using the HL7 Infobutton Standard.
Appl Clin Inform. 2016 Aug 31;7(3):817-31. doi: 10.4338/ACI-2016-04-RA-0058.
3
4
Prototype of a Standards-Based EHR and Genetic Test Reporting Tool Coupled with HL7-Compliant Infobuttons.
AMIA Jt Summits Transl Sci Proc. 2018 May 18;2017:330-339. eCollection 2018.
5
Practical choices for infobutton customization: experience from four sites.
AMIA Annu Symp Proc. 2013 Nov 16;2013:236-45. eCollection 2013.
6
Terminology challenges implementing the HL7 context-aware knowledge retrieval ('Infobutton') standard.
J Am Med Inform Assoc. 2013 Mar-Apr;20(2):218-23. doi: 10.1136/amiajnl-2012-001251. Epub 2012 Oct 16.
7
Optimization of infobutton design and Implementation: A systematic review.
J Biomed Inform. 2017 Oct;74:10-19. doi: 10.1016/j.jbi.2017.08.010. Epub 2017 Aug 22.
9
Analysis of empty responses from electronic resources in infobutton managers.
AMIA Annu Symp Proc. 2015 Nov 5;2015:852-60. eCollection 2015.
10

引用本文的文献

1
Improving Clinical Documentation with Artificial Intelligence: A Systematic Review.
Perspect Health Inf Manag. 2024 Jun 1;21(2):1d. eCollection 2024 Summer-Fall.
3
Infobuttons for Genomic Medicine: Requirements and Barriers.
Appl Clin Inform. 2021 Mar;12(2):383-390. doi: 10.1055/s-0041-1729164. Epub 2021 May 12.
6
Advances in Sharing Multi-sourced Health Data on Decision Support Science 2016-2017.
Yearb Med Inform. 2018 Aug;27(1):16-24. doi: 10.1055/s-0038-1641215. Epub 2018 Aug 29.
7
Prototype of a Standards-Based EHR and Genetic Test Reporting Tool Coupled with HL7-Compliant Infobuttons.
AMIA Jt Summits Transl Sci Proc. 2018 May 18;2017:330-339. eCollection 2018.
9
Advances in Clinical Decision Support: Highlights of Practice and the Literature 2015-2016.
Yearb Med Inform. 2017 Aug;26(1):125-132. doi: 10.15265/IY-2017-012. Epub 2017 Sep 11.
10
Practical considerations for implementing genomic information resources. Experiences from eMERGE and CSER.
Appl Clin Inform. 2016 Sep 21;7(3):870-82. doi: 10.4338/ACI-2016-04-RA-0060.

本文引用的文献

1
User-centered design of multi-gene sequencing panel reports for clinicians.
J Biomed Inform. 2016 Oct;63:1-10. doi: 10.1016/j.jbi.2016.07.014. Epub 2016 Jul 14.
2
ClinGen--the Clinical Genome Resource.
N Engl J Med. 2015 Jun 4;372(23):2235-42. doi: 10.1056/NEJMsr1406261. Epub 2015 May 27.
3
5
Database resources of the National Center for Biotechnology Information.
Nucleic Acids Res. 2015 Jan;43(Database issue):D6-17. doi: 10.1093/nar/gku1130. Epub 2014 Nov 14.
6
Diagnostic clinical genome and exome sequencing.
N Engl J Med. 2014 Jun 19;370(25):2418-25. doi: 10.1056/NEJMra1312543.
8
Clinical questions raised by clinicians at the point of care: a systematic review.
JAMA Intern Med. 2014 May;174(5):710-8. doi: 10.1001/jamainternmed.2014.368.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验