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转录组分析揭示了(鞘翅目:萤科)中参与荧光素代谢的候选基因。

Transcriptome analysis reveals candidate genes involved in luciferin metabolism in (Coleoptera: Lampyridae).

作者信息

Vongsangnak Wanwipa, Chumnanpuen Pramote, Sriboonlert Ajaraporn

机构信息

Department of Zoology, Kasetsart University, Bangkok, Thailand; Computational Biomodelling Laboratory for Agricultural Science and Technology (CBLAST), Faculty of Science, Kasetsart University, Bangkok, Thailand.

Department of Genetics, Kasetsart University, Bangkok, Thailand; Centre for Advanced Studies in Tropical Natural Resources, Kasetsart University, Bangkok, Thailand.

出版信息

PeerJ. 2016 Oct 4;4:e2534. doi: 10.7717/peerj.2534. eCollection 2016.

Abstract

Bioluminescence, which living organisms such as fireflies emit light, has been studied extensively for over half a century. This intriguing reaction, having its origins in nature where glowing insects can signal things such as attraction or defense, is now widely used in biotechnology with applications of bioluminescence and chemiluminescence. Luciferase, a key enzyme in this reaction, has been well characterized; however, the enzymes involved in the biosynthetic pathway of its substrate, luciferin, remains unsolved at present. To elucidate the luciferin metabolism, we performed a transcriptome analysis using larvae of the firefly species, . Here, a comparative analysis is performed with the model coleopteran insect to elucidate the metabolic pathways in . Based on a template luciferin biosynthetic pathway, combined with a range of protein and pathway databases, and various prediction tools for functional annotation, the candidate genes, enzymes, and biochemical reactions involved in luciferin metabolism are proposed for . The candidate gene expression is validated in the adult using reverse transcription PCR (RT-PCR). This study provides useful information on the bio-production of luciferin in the firefly and will benefit to future applications of the valuable firefly bioluminescence system.

摘要

生物发光,即萤火虫等生物发光的现象,已经被广泛研究了半个多世纪。这种有趣的反应起源于自然界,发光昆虫可以通过发光来传递诸如吸引或防御等信号,如今在生物技术中,生物发光和化学发光的应用十分广泛。荧光素酶是这种反应中的关键酶,已经得到了充分的表征;然而,其底物荧光素生物合成途径中涉及的酶目前仍未明确。为了阐明荧光素的代谢过程,我们使用萤火虫物种的幼虫进行了转录组分析。在此,我们与模式鞘翅目昆虫进行了比较分析,以阐明萤火虫中的代谢途径。基于荧光素生物合成途径模板,结合一系列蛋白质和途径数据库以及各种功能注释预测工具,提出了萤火虫中参与荧光素代谢的候选基因、酶和生化反应。使用逆转录聚合酶链反应(RT-PCR)在成年萤火虫中验证了候选基因的表达。本研究为萤火虫中荧光素的生物生产提供了有用信息,并将有助于有价值的萤火虫生物发光系统的未来应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10ec/5068357/84aab6f6097d/peerj-04-2534-g002.jpg

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