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通过理性定点诱变提高蔗糖酶Suc2的催化效率和热稳定性

Catalytic efficiency and thermostability improvement of Suc2 invertase through rational site-directed mutagenesis.

作者信息

Mohandesi Nooshin, Haghbeen Kamahldin, Ranaei Omid, Arab Seyed Shahriar, Hassani Sorour

机构信息

Department of Plant Bioproducts, National Institute of Genetic Engineering and Biotechnology. P.O. Box: 149651/161, Tehran, Iran.

Department of Plant Bioproducts, National Institute of Genetic Engineering and Biotechnology. P.O. Box: 149651/161, Tehran, Iran.

出版信息

Enzyme Microb Technol. 2017 Jan;96:14-22. doi: 10.1016/j.enzmictec.2016.09.004. Epub 2016 Sep 11.

Abstract

Engineering of invertases has come to attention because of increasing demand for possible applications of invertases in various industrial processes. Due to the known physicochemical properties, invertases from micro-organisms such as Saccharomyces cerevisiae carrying SUC2 gene are considered as primary models. To improve thermostability and catalytic efficiency of SUC2 invertase (SInv), six influential residues with Relative Solvent Accessibility<5% were selected through multiple-sequence alignments, molecular modelling, structural and computational analyses. Consequently, SInv and 5 mutants including three mutants with single point substitution [Mut1=P152V, Mut2=S85V and Mut3=K153F)], one mutant with two points [Mut4=S305V-N463V] and one mutant with three points [Mut5=S85V-K153F-T271V] were developed via site-directed mutagenesis and produced using Pichia pastoris as the host. Physicochemical studies on these enzymes indicated that the selected amino acids which were located in the active site region mainly influenced catalytic efficiency. The best improvement belonged to Mut1 (54% increase in K/K) and Mut3 exhibited the worst effect (90% increase in K). These results suggest that Pro152 and Lys153 play key role in preparation of the right substrate lodging in the active site of SInv. The best thermostability improvement (16%) was observed for Mut4 in which two hydrophilic residues located on the loops, far from the active site, were replaced by Valines. These results suggest that tactful simultaneous substitution of influential hydrophilic residues in both active site region and peripheral loops with hydrophobic amino acids could result in more thermostable invertases with enhanced catalytic efficiency.

摘要

由于转化酶在各种工业过程中的潜在应用需求不断增加,转化酶工程已受到关注。由于已知的物理化学性质,来自携带SUC2基因的酿酒酵母等微生物的转化酶被视为主要模型。为了提高SUC2转化酶(SInv)的热稳定性和催化效率,通过多序列比对、分子建模、结构和计算分析,选择了六个相对溶剂可及性<5%的有影响的残基。因此,通过定点诱变开发了SInv和5个突变体,包括三个单点取代突变体[Mut1=P152V、Mut2=S85V和Mut3=K153F]、一个两点突变体[Mut4=S305V-N463V]和一个三点突变体[Mut5=S85V-K153F-T271V],并以毕赤酵母为宿主进行生产。对这些酶的物理化学研究表明,位于活性位点区域的所选氨基酸主要影响催化效率。最佳改进属于Mut1(K/K增加54%),Mut3表现最差(K增加90%)。这些结果表明,Pro152和Lys153在准备正确的底物进入SInv活性位点方面起关键作用。在Mut4中观察到最佳的热稳定性提高(16%),其中位于远离活性位点的环上的两个亲水性残基被缬氨酸取代。这些结果表明,巧妙地同时用疏水性氨基酸取代活性位点区域和外周环中有影响的亲水性残基,可能会产生具有更高催化效率的更耐热的转化酶。

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