Huang Mei-Juan, Rao Manik Prabhu Narsing, Salam Nimaichand, Xiao Min, Huang Hai-Quan, Li Wen-Jun
Yunnan Institute of Microbiology, Yunnan University, Kunming 650091, PR China.
College of Landscape Architecture, Southwest Forestry University, Kunming 650224, PR China.
Int J Syst Evol Microbiol. 2017 Feb;67(2):288-293. doi: 10.1099/ijsem.0.001617. Epub 2017 Mar 16.
A Gram-stain-positive actinobacterium, designated strain YIM DR4008T, was isolated from the root sample of Psammosilene tunicoides collected from Lijiang, Yunnan, China. Strain YIM DR4008T could grow at temperatures ranging from 10 to 50 °C (optimum 28-30 °C), at pH 5.0-11.0 (optimum pH 7.0) and in the presence of up to 4 % (w/v) NaCl. Sequence analysis of the 16S ribosomal RNA gene revealed that strain YIM DR4008T shared highest similarity (95.0 %) with Streptomyces griseoplanus NBRC 12779T and <95 % similarity with other known members of the genera Streptomyces, Kitasatospora and Streptacidiphilus. The diagnostic cell-wall diamino acid of strain YIM DR4008T was found to be ll-diaminopimelic acid. The whole-cell hydrolysates contained a major amount of galactose and mannose along with a small proportion of fucose, glucose, rhamnose and ribose. The polar lipids consisted of diphosphatidylglycerol, phosphatidylinositol mannosides and three unidentified phospholipids. The respiratory menaquinones were MK-9(H6) and MK-9(H8), while the major cellular fatty acids (>10 %) were anteiso-C15 : 0, C16 : 0, iso-C16 : 0, iso-C15 : 0 and anteiso-C17 : 0. The genomic DNA G+C content was determined to be 75.3 mol%. Based on the phenotypic, chemotaxonomic and molecular characteristics, strain YIM DR4008T is proposed to be recognized as a novel species of a new genus in the family Streptomycetaceae, with the name Allostreptomyces psammosilenae gen. nov., sp. nov. The type strain of the type species is YIM DR4008T (=DSM 42178T=CGMCC 4.7247T). An emended description of the family Streptomycetaceae is also provided.
从中国云南丽江采集的金铁锁根样本中分离出一株革兰氏阳性放线菌,命名为YIM DR4008T菌株。YIM DR4008T菌株能在10至50°C(最适温度28 - 30°C)、pH值5.0 - 11.0(最适pH值7.0)以及高达4%(w/v)NaCl的条件下生长。16S核糖体RNA基因序列分析表明,YIM DR4008T菌株与灰色链霉菌NBRC 12779T的相似度最高(95.0%),与链霉菌属、北里孢菌属和嗜酸性链霉菌属的其他已知成员相似度均低于95%。发现YIM DR4008T菌株的诊断性细胞壁二氨基酸为ll - 二氨基庚二酸。全细胞水解产物含有大量半乳糖和甘露糖,以及少量岩藻糖、葡萄糖、鼠李糖和核糖。极性脂质由双磷脂酰甘油、磷脂酰肌醇甘露糖苷和三种未鉴定的磷脂组成。呼吸醌为MK - 9(H6)和MK - 9(H8),而主要的细胞脂肪酸(>10%)为anteiso - C15 : 0、C16 : 0、iso - C16 : 0、iso - C15 : 0和anteiso - C17 : 0。基因组DNA G + C含量测定为75.3 mol%。基于表型、化学分类和分子特征,提议将YIM DR4008T菌株认定为链霉菌科一个新属的新物种,命名为沙生异链霉菌(Allostreptomyces psammosilenae),新属,新种。模式种的模式菌株为YIM DR4008T(=DSM 42178T=CGMCC 4.7247T)。还提供了链霉菌科的修订描述。