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评估GenoType MTBDRplus检测法在埃塞俄比亚中部检测耐利福平及异烟肼结核分枝杆菌分离株的效果。

Evaluation of the GenoType MTBDRplus assay for detection of rifampicin- and isoniazid-resistant Mycobacterium tuberculosis isolates in central Ethiopia.

作者信息

Bedewi Omer Zufan, Mekonnen Yalemtsehay, Worku Adane, Zewde Aboma, Medhin Girmay, Mohammed Temesgen, Pieper Rembert, Ameni Gobena

机构信息

Aklilu Lemma Institute of Pathobiology, Addis Ababa University, Addis Ababa, Ethiopia; Department of Microbial, Cellular and Molecular Biology, College of Natural Sciences, Addis Ababa University, Addis Ababa, Ethiopia; Department of Biology, College of Natural Science and Computational Science, Hawassa University, Hawassa, Ethiopia.

Department of Microbial, Cellular and Molecular Biology, College of Natural Sciences, Addis Ababa University, Addis Ababa, Ethiopia.

出版信息

Int J Mycobacteriol. 2016 Dec;5(4):475-481. doi: 10.1016/j.ijmyco.2016.06.005. Epub 2016 Jun 27.

Abstract

OBJECTIVE/BACKGROUND: Multidrug-resistant tuberculosis (MDR-TB) is growing globally and becoming a major challenge for national TB control programs. Therefore, rapid identification of MDR strains of Mycobacterium tuberculosis and monitoring their transmission could contribute significantly to the control of TB. The GenoType MTBDRplus assay has been recommended by the World Health Organization to identify rifampicin (RIF)- and isoniazid (INH)-resistant M. tuberculosis isolates. This study was carried out to evaluate the performance of the GenoType MTBDRplus assay for the detection of RIF- and INH-resistant M. tuberculosis isolates in central Ethiopia.

METHODS

A total of 279 M. tuberculosis strains isolated from active TB cases in central Ethiopia were evaluated for their drug sensitivity by the conventional drug-susceptibility test (DST) and compared with data derived from the GenoType MTBDRplus assay. The DST served as the gold standard for evaluating the GenoType MTBDRplus assay.

RESULTS

The sensitivity and specificity of the GenoType MTBDRplus assay for the detection of RIF-resistant M. tuberculosis isolates were 80.0% and 99.6%, respectively. Its sensitivity and specificity for the detection of INH-resistant M. tuberculosis isolates were 82.7% and 99.6%, respectively, whereas they were 75.0% and 100%, respectively, for the detection of MDR M. tuberculosis strains. The concordances of the GenoType MTBDRplus assay and the conventional DST for the detection of RIF and INH susceptibility were 80% (8/10) and 86.2% (25/29), respectively. Furthermore, the concordance of the two tests for the detection of MDR M. tuberculosis strains was 75%. Specific mutations were detected in 55.6% (5/9) of the RIF-resistant isolates, with the highest mutation rate (33.3%) for the rpoB gene (Codon S531L). For INH-resistant isolates, the highest mutation rate (88.8%) related to a katG mutation (Codon S315T1).

CONCLUSION

The findings of this study revealed that the GenoType MTBDRplus assay has high sensitivity and specificity for the detection of RIF and INH resistance. These preliminary data support the notion that the assay should be considered as an alternative to the DST for the characterization of MDR in M. tuberculosis isolates and the control of TB.

摘要

目的/背景:耐多药结核病(MDR-TB)在全球范围内不断增加,成为各国结核病控制规划面临的一项重大挑战。因此,快速鉴定结核分枝杆菌的耐多药菌株并监测其传播情况,对于结核病的控制具有重要意义。世界卫生组织已推荐使用GenoType MTBDRplus检测法来鉴定耐利福平(RIF)和耐异烟肼(INH)的结核分枝杆菌分离株。本研究旨在评估GenoType MTBDRplus检测法在埃塞俄比亚中部检测耐RIF和耐INH结核分枝杆菌分离株的性能。

方法

对从埃塞俄比亚中部活动性结核病病例中分离出的279株结核分枝杆菌菌株,采用传统药敏试验(DST)评估其药敏情况,并与GenoType MTBDRplus检测法所得数据进行比较。DST作为评估GenoType MTBDRplus检测法的金标准。

结果

GenoType MTBDRplus检测法检测耐RIF结核分枝杆菌分离株的灵敏度和特异度分别为80.0%和99.6%。其检测耐INH结核分枝杆菌分离株的灵敏度和特异度分别为82.7%和99.6%,而检测耐多药结核分枝杆菌菌株的灵敏度和特异度分别为75.0%和100%。GenoType MTBDRplus检测法与传统DST检测RIF和INH药敏情况的一致性分别为80%(8/10)和86.2%(25/29)。此外,两种检测方法检测耐多药结核分枝杆菌菌株的一致性为75%。在55.6%(5/9)的耐RIF分离株中检测到特定突变,其中rpoB基因(密码子S531L)的突变率最高(33.3%)。对于耐INH分离株,与katG突变(密码子S315T1)相关的突变率最高(88.8%)。

结论

本研究结果表明,GenoType MTBDRplus检测法在检测RIF和INH耐药性方面具有较高的灵敏度和特异度。这些初步数据支持这样一种观点,即该检测法应被视为结核分枝杆菌分离株耐多药特性鉴定及结核病控制中DST的替代方法。

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