Núñez Carolina, Baeta Miriam, Ibarbia Nerea, Ortueta Urko, Jiménez-Moreno Susana, Blazquez-Caeiro José Luis, Builes Juan José, Herrera Rene J, Martínez-Jarreta Begoña, de Pancorbo Marian M
BIOMICs Research Group, Lascaray Research Center, University of the Basque Country UPV/EHU. Avda. Miguel de Unamuno, Vitoria-Gasteiz, Spain.
Área Medicina Legal y Forense, Department of Patología y Cirugía, Universidad Miguel Hernández de Elche, Elche, Alicante, Spain.
Electrophoresis. 2017 Apr;38(7):1016-1021. doi: 10.1002/elps.201600313. Epub 2017 Jan 13.
A Y-STR multiplex system has been developed with the purpose of complementing the widely used 17 Y-STR haplotyping (AmpFlSTR Y Filer® PCR Amplification kit) routinely employed in forensic and population genetic studies. This new multiplex system includes six additional STR loci (DYS576, DYS481, DYS549, DYS533, DYS570, and DYS643) to reach the 23 Y-STR of the PowerPlex® Y23 System. In addition, this kit includes the DYS456 and DYS385 loci for traceability purposes. Male samples from 625 individuals from ten worldwide populations were genotyped, including three sample sets from populations previously published with the 17 Y-STR system to expand their current data. Validation studies demonstrated good performance of the panel set in terms of concordance, sensitivity, and stability in the presence of inhibitors and artificially degraded DNA. The results obtained for haplotype diversity and discrimination capacity with this multiplex system were considerably high, providing further evidences of the suitability of this novel Y-STR system for forensic purposes. Thus, the use of this multiplex for samples previously genotyped with 17 Y-STRs will be an efficient and low-cost alternative to complete the set of 23 Y-STRs and improve allele databases for population and forensic purposes.
已开发出一种Y-STR复合扩增系统,旨在补充法医和群体遗传学研究中常规使用的广泛应用的17个Y-STR单倍型分型(AmpFlSTR Y Filer® PCR扩增试剂盒)。这个新的复合扩增系统包括另外六个STR基因座(DYS576、DYS481、DYS549、DYS533、DYS570和DYS643),以达到PowerPlex® Y23系统的23个Y-STR。此外,该试剂盒包含DYS456和DYS385基因座用于溯源目的。对来自全球十个群体的625个个体的男性样本进行了基因分型,其中包括三个先前已用17个Y-STR系统发表过数据的群体样本集,以扩展其现有数据。验证研究表明,该试剂盒在一致性、灵敏度以及在存在抑制剂和人工降解DNA的情况下的稳定性方面表现良好。使用该复合扩增系统获得的单倍型多样性和鉴别能力结果相当高,为这种新型Y-STR系统适用于法医目的提供了进一步证据。因此,将这种复合扩增系统用于先前已用17个Y-STR进行基因分型的样本,将是一种高效且低成本的替代方法,可用于完善23个Y-STR的数据集,并改善用于群体和法医目的的等位基因数据库。