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豹及其他猫科动物基因组所呈现的视角:饮食如何决定食肉动物、杂食动物和食草动物的进化史。

Perspectives provided by leopard and other cat genomes: how diet determined the evolutionary history of carnivores, omnivores, and herbivores.

作者信息

Kim Soonok, Cho Yun Sung, Bhak Jong, O'Brian Stephen J, Yeo Joo-Hong

机构信息

Biological and Genetic Resources Assessment Division, National Institute of Biological Resources, Incheon 22689, Korea.

The Genomics Institute, Ulsan National Institute of Science and Technology (UNIST); Department of Biomedical Engineering, School of Life Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Korea.

出版信息

BMB Rep. 2017 Jan;50(1):3-4. doi: 10.5483/bmbrep.2017.50.1.002.

Abstract

Recent advances in genome sequencing technologies have enabled humans to generate and investigate the genomes of wild species. This includes the big cat family, such as tigers, lions, and leopards. Adding the first high quality leopard genome, we have performed an in-depth comparative analysis to identify the genomic signatures in the evolution of felid to become the top predators on land. Our study focused on how the carnivore genomes, as compared to the omnivore or herbivore genomes, shared evolutionary adaptations in genes associated with nutrient metabolism, muscle strength, agility, and other traits responsible for hunting and meat digestion. We found genetic evidence that genomes represent what animals eat through modifying genes. Highly conserved genetically relevant regions were discovered in genomes at the family level. Also, the Felidae family genomes exhibited low levels of genetic diversity associated with decreased population sizes, presumably because of their strict diet, suggesting their vulnerability and critical conservation status. Our findings can be used for human health enhancement, since we share the same genes as cats with some variation. This is an example how wildlife genomes can be a critical resource for human evolution, providing key genetic marker information for disease treatment. [BMB Reports 2017; 50(1): 3-4].

摘要

基因组测序技术的最新进展使人类能够生成并研究野生物种的基因组。这包括大型猫科动物家族,如老虎、狮子和豹子。通过添加首个高质量的豹基因组,我们进行了深入的比较分析,以确定猫科动物进化成为陆地顶级捕食者过程中的基因组特征。我们的研究聚焦于与杂食动物或食草动物基因组相比,食肉动物基因组如何在与营养代谢、肌肉力量、敏捷性以及其他与捕猎和肉类消化相关的性状的基因中共享进化适应性。我们发现了基因证据,表明基因组通过修饰基因体现动物的饮食。在科级水平的基因组中发现了高度保守的基因相关区域。此外,猫科动物家族基因组表现出与种群规模减小相关的低水平遗传多样性,大概是由于它们严格的饮食结构,这表明它们的脆弱性和关键的保护地位。我们的发现可用于增进人类健康,因为我们与猫有一些相同的基因,只是存在一些差异。这是一个野生动物基因组如何成为人类进化的关键资源的例子,为疾病治疗提供关键的遗传标记信息。[《BMB报告》2017年;50(1): 3 - 4]

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