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从患病牛蛙中分离出的温和气单胞菌菌株08005的基因组序列草图

Draft Genome Sequence of Aeromonas sobria Strain 08005, Isolated from Sick Rana catesbeiana.

作者信息

Yang Qiu-Hua, Zhou Chen, Lin Qi, Lu Zhen, He Li-Bin, Guo Song-Lin

机构信息

Key Laboratory of Cultivation and High-Value Utilization of Marine Organisms in Fujian Province, Fisheries Research Institute of Fujian, Xiamen, China.

Fisheries College, Jimei University, Xiamen, China

出版信息

Genome Announc. 2017 Jan 12;5(2):e01352-16. doi: 10.1128/genomeA.01352-16.

Abstract

Aeromonas sobria is a Gram-negative, rod-shaped, and ubiquitous bacterium. We present here the draft genome sequence of A. sobria strain 08005, isolated from an infected bullfrog. It is composed of 66 contigs totaling 4,678,951 bp, contains 4,252 coding DNA sequences (CDSs), four rRNAs, and 88 tRNA sequences, and shows the presence of various putative virulence-related genes.

摘要

温和气单胞菌是一种革兰氏阴性、杆状且广泛存在的细菌。我们在此展示从一只受感染牛蛙中分离出的温和气单胞菌菌株08005的基因组草图序列。它由66个重叠群组成,总计4,678,951碱基对,包含4,252个编码DNA序列(CDS)、4个rRNA和88个tRNA序列,并显示存在各种假定的毒力相关基因。

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本文引用的文献

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Quake: quality-aware detection and correction of sequencing errors.Quake:测序错误的质量感知检测和校正。
Genome Biol. 2010;11(11):R116. doi: 10.1186/gb-2010-11-11-r116. Epub 2010 Nov 29.
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