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Born-Oppenheimer 分子动力学研究 Pb(ii)微水气相团簇。

Born-Oppenheimer molecular dynamics studies of Pb(ii) micro hydrated gas phase clusters.

机构信息

Instituto de Ciencias Físicas, Universidad Autónoma de México, Apdo. Postal 48-3, Cuernavaca, Morelos 62251, Mexico.

Depto. de Física, Centro de Investigación en Ciencias, IICBA. Universidad Autónoma del Estado de Morelos, Cuernavaca, Morelos 62209, Mexico.

出版信息

J Chem Phys. 2017 Feb 28;146(8):084307. doi: 10.1063/1.4976686.

Abstract

In this work, a theoretical investigation was made to assess the coordination properties of Pb(ii) in [Pb(HO)] clusters, with n = 4, 6, 8, 12, and 29, as well as to study proton transfer events, by means of Born-Oppenheimer molecular dynamics simulations at the B3LYP/aug-cc-pVDZ-pp/6-311G level of theory, that were calibrated in comparison with B3LYP/aug-cc-pVDZ-PP/aug-cc-pVDZ calculations. Hemidirected configurations were found in all cases; the radial distribution functions (RDFs) produced well defined first hydration shells (FHSs) for n = 4,6,8, and 12, that resulted in a coordination number CN = 4, whereas a clear-cut FHS was not found for n = 29 because the RDF did not have a vacant region after the first maximum; however, three water molecules remained directly interacting with the Pb ion for the whole simulation, while six others stayed at average distances shorter than 4 Å but dynamically getting closer and farther, thus producing a CN ranging from 6 to 9, depending on the criterion used to define the first hydration shell. In agreement with experimental data and previous calculations, proton transfer events were observed for n≤8 but not for n≥12. For an event to occur, a water molecule in the second hydration shell had to make a single hydrogen bond with a water molecule in the first hydration shell.

摘要

在这项工作中,通过 Born-Oppenheimer 分子动力学模拟,在 B3LYP/aug-cc-pVDZ-PP/aug-cc-pVDZ 计算的基础上进行了校准,理论上评估了 Pb(ii)在[Pb(HO)]团簇中的配位性质,其中 n = 4、6、8、12 和 29,以及研究质子转移事件。在所有情况下都发现了半直接构型;径向分布函数(RDF)为 n = 4、6、8 和 12 产生了明确的第一水合壳(FHS),配位数 CN = 4,而对于 n = 29 则没有明确的 FHS,因为 RDF 在第一个最大值之后没有空缺区域;然而,在整个模拟过程中,有三个水分子仍然与 Pb 离子直接相互作用,而另外六个水分子保持在平均距离小于 4 Å 但动态上更接近和更远的距离,因此产生的 CN 范围从 6 到 9,具体取决于用于定义第一水合壳的标准。与实验数据和先前的计算结果一致,观察到 n≤8 时发生质子转移事件,但 n≥12 时则没有。为了发生事件,第二水合壳中的一个水分子必须与第一水合壳中的一个水分子形成单个氢键。

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