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钐碘化物的水合作用:一种基于玻恩-奥本海默分子动力学密度泛函理论的簇方法。

Aqueous Solvation of SmI: A Born-Oppenheimer Molecular Dynamics Density Functional Theory Cluster Approach.

作者信息

Ramı Rez-Solı S A, Amaro-Estrada J I, Hernández-Cobos J, Maron L

机构信息

Depto. de Física, Centro de Investigación en Ciencias-IICBA Universidad Autónoma del Estado de Morelos , Cuernavaca, Morelos 62209, México.

Instituto de Ciencias Físicas, UNAM , Cuernavaca, Morelos 62210, México.

出版信息

J Phys Chem A. 2017 Mar 23;121(11):2293-2297. doi: 10.1021/acs.jpca.7b00910. Epub 2017 Mar 14.

Abstract

We report the results of Born-Oppenheimer molecular dynamics (BOMD) simulations on the aqueous solvation of the SmI molecule at room temperature using the cluster microsolvation approach including 32 water molecules. The electronic structure calculations were done using the M062X hybrid exchange-correlation functional in conjunction with the 6-31G** basis sets for oxygen and hydrogen. For the iodine and samarium atoms the Stuttgart-Köln relativistic effective-core potentials were utilized with their associated valence basis sets. Starting from the optimized geometry of SmI embeded in the microsolvation environment, we find a swift substitution of the iodine ions by eight tightly bound water molecules around Sm(II). Through the Sm-O radial distribution function and the evolution of the Sm-O distances, the present study predicts a first rigid Sm(II) solvation shell from 2.6 to 3.4 Å, whose integration leads to a coordination number of 8.4 water molecules, and a second softer solvation sphere from 3.5 to ca. 6 Å. The Sm(II)-O radial distribution function is in excellent agreement with that reported for Sr from EXAFS studies, a fact that can be explained because Sr and Sm have almost identical ionic radii (ca. 1.26 Å) and coordination numbers: 8 for Sr and 8.4 for Sm. The theoretical EXAFS spectrum was obtained from the BOMD trajectory and is discussed in the light of the experimental spectra for Sm(III). Once microsolvation is achieved, no water exchange events were found to occur around Sm, in agreement with the experimental data for Eu (which has a nearly identical charge-to-ionic radius relation as Sm), where the mean residence time of a water molecule in [Eu(HO)] is known to be ca. 230 ps.

摘要

我们报告了使用包含32个水分子的团簇微溶剂化方法,在室温下对SmI分子进行Born-Oppenheimer分子动力学(BOMD)模拟的结果。电子结构计算使用M062X杂化交换相关泛函,并结合氧和氢的6-31G**基组。对于碘和钐原子,使用了斯图加特-科隆相对论有效核势及其相关的价基组。从嵌入微溶剂化环境中的SmI的优化几何结构出发,我们发现Sm(II)周围的碘离子迅速被八个紧密结合的水分子取代。通过Sm-O径向分布函数和Sm-O距离的演化,本研究预测了第一个刚性的Sm(II)溶剂化壳层,其半径范围为2.6至3.4 Å,积分后得到的配位数为8.4个水分子,以及第二个较软的溶剂化球壳,半径范围为3.5至约6 Å。Sm(II)-O径向分布函数与EXAFS研究中报道的Sr的函数非常吻合,这一事实可以解释为Sr和Sm具有几乎相同的离子半径(约1.26 Å)和配位数:Sr为8,Sm为8.4。理论EXAFS光谱是从BOMD轨迹获得的,并根据Sm(III)的实验光谱进行了讨论。一旦实现微溶剂化,未发现Sm周围发生水交换事件,这与Eu的实验数据一致(Eu的电荷与离子半径关系与Sm几乎相同),已知水分子在[Eu(HO)]中的平均停留时间约为230 ps。

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