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对通过免疫蛋白质组学鉴定出的利什曼原虫属假设蛋白衍生的潜在药物靶点进行计算机功能注释和筛选。

An in silico functional annotation and screening of potential drug targets derived from Leishmania spp. hypothetical proteins identified by immunoproteomics.

作者信息

Chávez-Fumagalli Miguel A, Schneider Mônica S, Lage Daniela P, Machado-de-Ávila Ricardo A, Coelho Eduardo A F

机构信息

Programa de Pós-Graduação em Ciências da Saúde: Infectologia e Medicina Tropical, Faculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.

Programa de Pós-Graduação em Ciências da Saúde: Infectologia e Medicina Tropical, Faculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.

出版信息

Exp Parasitol. 2017 May;176:66-74. doi: 10.1016/j.exppara.2017.03.005. Epub 2017 Mar 19.

Abstract

Leishmaniasis is a parasitic disease caused by the protozoan of the Leishmania genus. While no human vaccine is available, drugs such as pentavalent antimonials, pentamidine and amphotericin B are used for treat the patients. However, the high toxicity of these pharmaceutics, the emergence of parasite resistance and/or their high cost have showed to the urgent need of identify new targets to be employed in the improvement of the treatment against leishmaniasis. In a recent immunoproteomics approach performed in the Leishmania infantum species, 104 antigenic proteins were recognized by antibodies in sera of visceral leishmaniasis (VL) dogs. Some of them were later showed to be effective diagnostic markers and/or vaccine candidates against the disease. Between these proteins, 24 considered as hypothetical were identified in the promastigote and amastigote-like extracts of the parasites. The present study aimed to use bioinformatics tools to select new drug targets between these hypothetical proteins. Their cellular localization was predicted to be seven membrane proteins, as well as eight cytoplasmic, three nuclear, one mitochondrial and five proteins remained unclassified. Their functions were predicted as being two transport proteins, as well as five with metabolic activity, three as cell signaling and fourteen proteins remained unclassified. Ten hypothetical proteins were well-annotated and compared to their homology regarding to human proteins. Two proteins, a calpain-like and clavaminate synthase-like proteins were selected by using Docking analysis as being possible drug targets. In this sense, the present study showed the employ of new strategies to select possible drug candidates, according their localization and biological function in Leishmania parasites, aiming to treat against VL.

摘要

利什曼病是一种由利什曼原虫属原生动物引起的寄生虫病。虽然目前尚无人类疫苗,但五价锑剂、喷他脒和两性霉素B等药物可用于治疗患者。然而,这些药物的高毒性、寄生虫耐药性的出现和/或其高成本表明,迫切需要确定新的靶点,以改进利什曼病的治疗方法。在最近对婴儿利什曼原虫进行的免疫蛋白质组学研究中,内脏利什曼病(VL)犬血清中的抗体识别出了104种抗原蛋白。其中一些后来被证明是有效的诊断标志物和/或该疾病的疫苗候选物。在这些蛋白质中,有24种被认为是假设性的,在寄生虫的前鞭毛体和类无鞭毛体提取物中被鉴定出来。本研究旨在利用生物信息学工具在这些假设性蛋白质中筛选新的药物靶点。预测它们的细胞定位为七种膜蛋白,以及八种细胞质蛋白、三种核蛋白、一种线粒体蛋白和五种未分类蛋白。预测它们的功能为两种转运蛋白,以及五种具有代谢活性的蛋白、三种细胞信号蛋白和十四种未分类蛋白。对十种假设性蛋白进行了详细注释,并与它们与人蛋白的同源性进行了比较。通过对接分析选择了两种蛋白,一种钙蛋白酶样蛋白和一种克拉维酸合成酶样蛋白作为可能的药物靶点。从这个意义上说,本研究展示了采用新策略根据利什曼原虫寄生虫中的定位和生物学功能筛选可能的药物候选物,旨在治疗内脏利什曼病。

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