Schultz Nicholas G, Otárola-Castillo Erik, Dean Matthew D
Molecular and Computational Biology, University of Southern California (USC).
Purdue University.
J Vis Exp. 2017 Mar 19(121):55342. doi: 10.3791/55342.
Modern morphometrics provides powerful methods to quantify size and shape variation. A basic requirement is a list of coordinates that define landmarks; however such coordinates must represent homologous structures across specimens. While many biological objects consist of easily identified landmarks to satisfy the assumption of homology, many lack such structures. One potential solution is to mathematically place semi-landmarks on an object that represent the same morphological region across specimens. Here, we illustrate a recently developed pipeline to mathematically define semi-landmarks from the mouse baculum (penis bone). Our methods should be applicable to a wide range of objects.
现代形态测量学提供了强大的方法来量化大小和形状变化。一个基本要求是一份定义地标点的坐标列表;然而,这样的坐标必须代表不同标本间的同源结构。虽然许多生物对象包含易于识别的地标点以满足同源性假设,但许多缺乏此类结构。一种潜在的解决方案是在对象上数学地放置半地标点,这些点代表不同标本间相同的形态区域。在此,我们展示了一种最近开发的流程,用于从小鼠阴茎骨数学地定义半地标点。我们的方法应适用于广泛的对象。