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用于研究蛋白质结构与动力学的时间分辨电喷雾电离氢氘交换质谱法

Time-resolved ElectroSpray Ionization Hydrogen-deuterium Exchange Mass Spectrometry for Studying Protein Structure and Dynamics.

作者信息

Lento Cristina, Zhu Shaolong, Brown Kerene A, Knox Ruth, Liuni Peter, Wilson Derek J

机构信息

Department of Chemistry, York University.

Department of Chemistry, York University; The Centre for Research in Mass Spectrometry, York University; The Centre for Research on Biomolecular Interactions, York University;

出版信息

J Vis Exp. 2017 Apr 17(122):55464. doi: 10.3791/55464.

Abstract

Intrinsically disordered proteins (IDPs) have long been a challenge to structural biologists due to their lack of stable secondary structure elements. Hydrogen-Deuterium Exchange (HDX) measured at rapid time scales is uniquely suited to detect structures and hydrogen bonding networks that are briefly populated, allowing for the characterization of transient conformers in native ensembles. Coupling of HDX to mass spectrometry offers several key advantages, including high sensitivity, low sample consumption and no restriction on protein size. This technique has advanced greatly in the last several decades, including the ability to monitor HDX labeling times on the millisecond time scale. In addition, by incorporating the HDX workflow onto a microfluidic platform housing an acidic protease microreactor, we are able to localize dynamic properties at the peptide level. In this study, Time-Resolved ElectroSpray Ionization Mass Spectrometry (TRESI-MS) coupled to HDX was used to provide a detailed picture of residual structure in the tau protein, as well as the conformational shifts induced upon hyperphosphorylation.

摘要

由于缺乏稳定的二级结构元件,内在无序蛋白(IDP)长期以来一直是结构生物学家面临的挑战。在快速时间尺度上测量的氢-氘交换(HDX)特别适合检测短暂形成的结构和氢键网络,从而能够表征天然蛋白质组中的瞬时构象异构体。HDX与质谱联用具有几个关键优势,包括高灵敏度、低样品消耗以及对蛋白质大小没有限制。在过去几十年中,这项技术有了很大的进步,包括能够在毫秒时间尺度上监测HDX标记时间。此外,通过将HDX工作流程整合到一个容纳酸性蛋白酶微反应器的微流控平台上,我们能够在肽水平上定位动态特性。在本研究中,与HDX联用的时间分辨电喷雾电离质谱(TRESI-MS)被用于提供tau蛋白中残余结构的详细图谱,以及过度磷酸化诱导的构象变化。

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