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微生物群体中的实验性进化以及适应与基因组进化的动力学

Experimental evolution and the dynamics of adaptation and genome evolution in microbial populations.

作者信息

Lenski Richard E

机构信息

Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI, USA.

Graduate Program in Ecology, Evolutionary Biology and Behavior, Michigan State University, East Lansing, MI, USA.

出版信息

ISME J. 2017 Oct;11(10):2181-2194. doi: 10.1038/ismej.2017.69. Epub 2017 May 16.

Abstract

Evolution is an on-going process, and it can be studied experimentally in organisms with rapid generations. My team has maintained 12 populations of Escherichia coli in a simple laboratory environment for >25 years and 60 000 generations. We have quantified the dynamics of adaptation by natural selection, seen some of the populations diverge into stably coexisting ecotypes, described changes in the bacteria's mutation rate, observed the new ability to exploit a previously untapped carbon source, characterized the dynamics of genome evolution and used parallel evolution to identify the genetic targets of selection. I discuss what the future might hold for this particular experiment, briefly highlight some other microbial evolution experiments and suggest how the fields of experimental evolution and microbial ecology might intersect going forward.

摘要

进化是一个持续的过程,并且可以在繁殖迅速的生物体中通过实验进行研究。我的团队在一个简单的实验室环境中维持了12个大肠杆菌种群超过25年,历经60000代。我们已经通过自然选择量化了适应的动态过程,观察到一些种群分化为稳定共存的生态型,描述了细菌突变率的变化,观察到利用先前未开发碳源的新能力,表征了基因组进化的动态过程,并利用平行进化来确定选择的遗传靶点。我将讨论这个特定实验的未来可能走向,简要介绍一些其他的微生物进化实验,并提出实验进化和微生物生态学领域未来可能如何交叉。

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本文引用的文献

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