Zhang Tao, Liu Chang, Huang Shi, Ma Yuanping, Fang Jiansong, Chen Yuanneng
Department of Gastroenterology, Ruikang Hospital, Guangxi Traditional Chinese Medical University, Nanning, Guangxi 530011, China.
Gastroenterol Res Pract. 2017;2017:1526981. doi: 10.1155/2017/1526981. Epub 2017 May 4.
. Here, we aim to investigate the microRNA (miR) profiling in human gastric cancer (GC). . Tumoral and matched peritumoral gastric specimens were collected from 12 GC patients who underwent routine surgery. A high-throughput miR sequencing method was applied to detect the aberrantly expressed miRs in a subset of 6 paired samples. The stem-loop quantitative real-time polymerase chain reaction (qRT-PCR) assay was subsequently performed to confirm the sequencing results in the remaining 6 paired samples. The profiling results were also validated in vitro in three human GC cell lines (BGC-823, MGC-803, and GTL-16) and a normal gastric epithelial cell line (GES-1). . The miR sequencing approach detected 5 differentially expressed miRs, hsa-miR-132-3p, hsa-miR-155-5p, hsa-miR-19b-3p, hsa-miR-204-5p, and hsa-miR-30a-3p, which were significantly downmodulated between the tumoral and peritumoral GC tissues. Most of the results were further confirmed by qRT-PCR, while no change was observed for hsa-miR-30a-3p. The in vitro finding also agreed with the results of both miR sequencing and qRT-PCR for hsa-miR-204-5p, hsa-miR-155-5p, and hsa-miR-132-3p. . Together, our findings may serve to identify new molecular alterations as well as to enrich the miR profiling in human GC.
在此,我们旨在研究人类胃癌(GC)中的微小RNA(miR)谱。从12例行常规手术的GC患者中收集肿瘤及配对的癌旁胃组织标本。应用高通量miR测序方法检测6对样本子集中异常表达的miR。随后进行茎环定量实时聚合酶链反应(qRT-PCR)检测,以确认其余6对样本的测序结果。还在三种人类GC细胞系(BGC-823、MGC-803和GTL-16)和一种正常胃上皮细胞系(GES-1)中对谱分析结果进行了体外验证。miR测序方法检测到5种差异表达的miR,即hsa-miR-132-3p、hsa-miR-155-5p、hsa-miR-19b-3p、hsa-miR-204-5p和hsa-miR-30a-3p,它们在肿瘤和癌旁GC组织之间显著下调。大多数结果通过qRT-PCR进一步得到证实,而hsa-miR-30a-3p未观察到变化。体外研究结果也与hsa-miR-204-5p、hsa-miR-155-5p和hsa-miR-132-3p的miR测序及qRT-PCR结果一致。总之,我们的研究结果可能有助于识别新的分子改变,并丰富人类GC中的miR谱。