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利用稳定同位素分辨代谢组学(SIRM)探索癌症代谢。

Exploring cancer metabolism using stable isotope-resolved metabolomics (SIRM).

作者信息

Bruntz Ronald C, Lane Andrew N, Higashi Richard M, Fan Teresa W-M

机构信息

Center for Environmental and Systems Biochemistry, Markey Cancer Center, Lexington, Kentucky 40506; Department of Toxicology and Cancer Biology, University of Kentucky, Lexington, Kentucky 40506.

Center for Environmental and Systems Biochemistry, Markey Cancer Center, Lexington, Kentucky 40506; Department of Toxicology and Cancer Biology, University of Kentucky, Lexington, Kentucky 40506.

出版信息

J Biol Chem. 2017 Jul 14;292(28):11601-11609. doi: 10.1074/jbc.R117.776054. Epub 2017 Jun 7.

Abstract

Metabolic reprogramming is a hallmark of cancer. The changes in metabolism are adaptive to permit proliferation, survival, and eventually metastasis in a harsh environment. Stable isotope-resolved metabolomics (SIRM) is an approach that uses advanced approaches of NMR and mass spectrometry to analyze the fate of individual atoms from stable isotope-enriched precursors to products to deduce metabolic pathways and networks. The approach can be applied to a wide range of biological systems, including human subjects. This review focuses on the applications of SIRM to cancer metabolism and its use in understanding drug actions.

摘要

代谢重编程是癌症的一个标志。代谢变化具有适应性,以允许在恶劣环境中增殖、存活并最终发生转移。稳定同位素分辨代谢组学(SIRM)是一种利用核磁共振(NMR)和质谱的先进方法,来分析从稳定同位素富集前体到产物的单个原子的去向,从而推断代谢途径和网络的方法。该方法可应用于广泛的生物系统,包括人类受试者。本综述重点关注SIRM在癌症代谢中的应用及其在理解药物作用方面的用途。

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本文引用的文献

4
Preclinical models for interrogating drug action in human cancers using Stable Isotope Resolved Metabolomics (SIRM).
Metabolomics. 2016 Jul;12(7). doi: 10.1007/s11306-016-1065-y. Epub 2016 Jun 29.
5
Biomarker development in the precision medicine era: lung cancer as a case study.
Nat Rev Cancer. 2016 Aug;16(8):525-37. doi: 10.1038/nrc.2016.56. Epub 2016 Jul 8.
6
Stable Isotope Resolved Metabolomics Studies TIssue Slices.
Bio Protoc. 2016 Feb 5;6(3). doi: 10.21769/bioprotoc.1730.
7
Applications of NMR spectroscopy to systems biochemistry.
Prog Nucl Magn Reson Spectrosc. 2016 Feb;92-93:18-53. doi: 10.1016/j.pnmrs.2016.01.005. Epub 2016 Feb 6.
9
Environment Impacts the Metabolic Dependencies of Ras-Driven Non-Small Cell Lung Cancer.
Cell Metab. 2016 Mar 8;23(3):517-28. doi: 10.1016/j.cmet.2016.01.007. Epub 2016 Feb 4.
10
Metabolic Heterogeneity in Human Lung Tumors.
Cell. 2016 Feb 11;164(4):681-94. doi: 10.1016/j.cell.2015.12.034. Epub 2016 Feb 4.

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