• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

测量 MicroED。

Taking the measure of MicroED.

机构信息

Department of Chemistry and Biochemistry, UCLA-DOE Institute, University of California, Los Angeles, Los Angeles, CA, USA.

Department of Biological Chemistry and Department of Chemistry and Biochemistry, University of California Los Angeles (UCLA), Howard Hughes Medical Institute (HHMI), UCLA-DOE Institute for Genomics and Proteomics, Los Angeles, CA 90095, USA.

出版信息

Curr Opin Struct Biol. 2017 Oct;46:79-86. doi: 10.1016/j.sbi.2017.06.004. Epub 2017 Jun 22.

DOI:10.1016/j.sbi.2017.06.004
PMID:28648726
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5683914/
Abstract

It is now possible to routinely determine atomic resolution structures by electron cryo-microscopy (cryoEM), facilitated in part by the method known as micro electron-diffraction (MicroED). Since its initial demonstration in 2013, MicroED has helped determine a variety of protein structures ranging in molecular weight from a few hundred Daltons to several hundred thousand Daltons. Some of these structures were novel while others were previously known. The resolutions of structures obtained thus far by MicroED range from 3.2Å to 1.0Å, with most better than 2.5Å. Crystals of various sizes and shapes, with different space group symmetries, and with a range of solvent content have all been studied by MicroED. The wide range of crystals explored to date presents the community with a landscape of opportunity for structure determination from nano crystals. Here we summarize the lessons we have learned during the first few years of MicroED, and from our attempts at the first ab initio structure determined by the method. We re-evaluate theoretical considerations in choosing the appropriate crystals for MicroED and for extracting the most meaning out of measured data. With more laboratories worldwide adopting the technique, we speculate what the first decade might hold for MicroED.

摘要

现在可以通过电子晶体学显微镜(cryoEM)常规地确定原子分辨率结构,这在一定程度上得益于称为微电子衍射(MicroED)的方法。自 2013 年首次演示以来,MicroED 已帮助确定了各种分子量从几百道尔顿到几十万道尔顿的蛋白质结构。其中一些结构是新颖的,而另一些则是先前已知的。迄今为止,通过 MicroED 获得的结构分辨率范围为 3.2Å 至 1.0Å,大多数优于 2.5Å。MicroED 研究了各种大小和形状的晶体,具有不同的空间群对称性,并且具有不同的溶剂含量。迄今为止探索的广泛晶体为纳米晶体的结构测定提供了机会。在这里,我们总结了在 MicroED 的最初几年中以及在我们首次尝试通过该方法确定从头结构中所学到的经验教训。我们重新评估了在选择适合 MicroED 的晶体以及从测量数据中提取最有意义信息方面的理论考虑。随着全球更多的实验室采用该技术,我们推测 MicroED 的第一个十年可能会是什么样子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e271/5683914/afa8b385650c/nihms913891f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e271/5683914/2990e110cc70/nihms913891f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e271/5683914/bc1289de3a49/nihms913891f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e271/5683914/afa8b385650c/nihms913891f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e271/5683914/2990e110cc70/nihms913891f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e271/5683914/bc1289de3a49/nihms913891f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e271/5683914/afa8b385650c/nihms913891f3.jpg

相似文献

1
Taking the measure of MicroED.测量 MicroED。
Curr Opin Struct Biol. 2017 Oct;46:79-86. doi: 10.1016/j.sbi.2017.06.004. Epub 2017 Jun 22.
2
Atomic resolution structure determination by the cryo-EM method MicroED.通过低温电子显微镜方法MicroED进行原子分辨率结构测定。
Protein Sci. 2017 Jan;26(1):8-15. doi: 10.1002/pro.2989. Epub 2016 Aug 19.
3
High-Resolution Macromolecular Structure Determination by MicroED, a cryo-EM Method.通过MicroED(一种冷冻电镜方法)进行高分辨率大分子结构测定。
Methods Enzymol. 2016;579:369-92. doi: 10.1016/bs.mie.2016.04.017. Epub 2016 Jun 16.
4
MicroED opens a new era for biological structure determination.微晶电子衍射开启了生物结构测定的新纪元。
Curr Opin Struct Biol. 2016 Oct;40:128-135. doi: 10.1016/j.sbi.2016.09.007. Epub 2016 Oct 1.
5
Protein and Small Molecule Structure Determination by the Cryo-EM Method MicroED.利用冷冻电镜(Cryo-EM)方法的微束电子衍射(MicroED)进行蛋白质和小分子结构测定。
Methods Mol Biol. 2021;2305:323-342. doi: 10.1007/978-1-0716-1406-8_16.
6
Structure determination of a DNA crystal by MicroED.通过微晶电子衍射法测定DNA晶体的结构。
Structure. 2023 Dec 7;31(12):1499-1503.e2. doi: 10.1016/j.str.2023.07.005. Epub 2023 Aug 3.
7
Studying membrane proteins with MicroED.用微晶电子衍射技术研究膜蛋白。
Biochem Soc Trans. 2022 Feb 28;50(1):231-239. doi: 10.1042/BST20210911.
8
The cryo-EM method microcrystal electron diffraction (MicroED).低温电子显微镜方法——微晶体电子衍射(MicroED)。
Nat Methods. 2019 May;16(5):369-379. doi: 10.1038/s41592-019-0395-x. Epub 2019 Apr 29.
9
Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.利用低温电子显微镜方法MicroED获得的片段化蛋白质晶体的原子分辨率结构。
Nat Methods. 2017 Feb 13;14(4):399-402. doi: 10.1038/nmeth.4178.
10
Experimental Phasing of MicroED Data Using Radiation Damage.利用辐射损伤进行微 ED 数据的实验相分析。
Structure. 2020 Apr 7;28(4):458-464.e2. doi: 10.1016/j.str.2020.01.008. Epub 2020 Feb 4.

引用本文的文献

1
Fast event-based electron counting for small-molecule structure determination by MicroED.通过微电子衍射进行小分子结构测定的基于事件的快速电子计数
Acta Crystallogr C Struct Chem. 2025 Mar 1;81(Pt 3):116-130. doi: 10.1107/S2053229624012300. Epub 2025 Feb 21.
2
3D Nanocrystallography and the Imperfect Molecular Lattice.3D纳米晶体学与不完美分子晶格
Annu Rev Phys Chem. 2024 Jun;75(1):483-508. doi: 10.1146/annurev-physchem-083122-105226.
3
Forty years in cryoEM of membrane proteins.冷冻电镜技术解析膜蛋白的四十年

本文引用的文献

1
Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.利用低温电子显微镜方法MicroED获得的片段化蛋白质晶体的原子分辨率结构。
Nat Methods. 2017 Feb 13;14(4):399-402. doi: 10.1038/nmeth.4178.
2
Atomic structures of fibrillar segments of hIAPP suggest tightly mated β-sheets are important for cytotoxicity.人胰岛淀粉样多肽(hIAPP)纤维状片段的原子结构表明,紧密配对的β-折叠片层对细胞毒性很重要。
Elife. 2017 Jan 3;6:e19273. doi: 10.7554/eLife.19273.
3
Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.
Microscopy (Oxf). 2022 Feb 18;71(Supplement_1):i30-i50. doi: 10.1093/jmicro/dfab041.
4
Challenges in solving structures from radiation-damaged tomograms of protein nanocrystals assessed by simulation.通过模拟评估解决蛋白质纳米晶体辐射损伤断层扫描图像结构的挑战。
Acta Crystallogr D Struct Biol. 2021 May 1;77(Pt 5):572-586. doi: 10.1107/S2059798321002369. Epub 2021 Apr 14.
5
Taming Radical Pairs in the Crystalline Solid State: Discovery and Total Synthesis of Psychotriadine.在晶态固体中驯服自由基对:精神三烷的发现和全合成。
J Am Chem Soc. 2021 Mar 17;143(10):4043-4054. doi: 10.1021/jacs.1c01100. Epub 2021 Mar 8.
6
Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.淀粉样寡聚体:阿尔茨海默病、帕金森病、2 型糖尿病和肌萎缩侧索硬化症的联合实验/计算研究视角。
Chem Rev. 2021 Feb 24;121(4):2545-2647. doi: 10.1021/acs.chemrev.0c01122. Epub 2021 Feb 5.
7
Data-driven challenges and opportunities in crystallography.晶体学中数据驱动的挑战与机遇。
Emerg Top Life Sci. 2019 Aug 16;3(4):423-432. doi: 10.1042/ETLS20180177.
8
Ab Initio Determination of Peptide Structures by MicroED.从头确定肽结构的微 ED 法。
Methods Mol Biol. 2021;2215:329-348. doi: 10.1007/978-1-0716-0966-8_17.
9
The complementarity of serial femtosecond crystallography and MicroED for structure determination from microcrystals.串行飞秒晶体学和微束电子衍射在微晶体结构测定中的互补性。
Curr Opin Struct Biol. 2019 Oct;58:286-293. doi: 10.1016/j.sbi.2019.06.004. Epub 2019 Jul 22.
10
The cryo-EM method microcrystal electron diffraction (MicroED).低温电子显微镜方法——微晶体电子衍射(MicroED)。
Nat Methods. 2019 May;16(5):369-379. doi: 10.1038/s41592-019-0395-x. Epub 2019 Apr 29.
通过微电子衍射从朊病毒纳米晶体中以原子分辨率从头确定结构。
Proc Natl Acad Sci U S A. 2016 Oct 4;113(40):11232-11236. doi: 10.1073/pnas.1606287113. Epub 2016 Sep 19.
4
High-Resolution Macromolecular Structure Determination by MicroED, a cryo-EM Method.通过MicroED(一种冷冻电镜方法)进行高分辨率大分子结构测定。
Methods Enzymol. 2016;579:369-92. doi: 10.1016/bs.mie.2016.04.017. Epub 2016 Jun 16.
5
Modeling truncated pixel values of faint reflections in MicroED images.对MicroED图像中微弱反射的截断像素值进行建模。
J Appl Crystallogr. 2016 May 11;49(Pt 3):1029-1034. doi: 10.1107/S1600576716007196. eCollection 2016 Jun 1.
6
The collection of MicroED data for macromolecular crystallography.用于大分子晶体学的微晶电子衍射(MicroED)数据收集
Nat Protoc. 2016 May;11(5):895-904. doi: 10.1038/nprot.2016.046. Epub 2016 Apr 14.
7
Progress in low-resolution ab initio phasing with CrowdPhase.使用CrowdPhase进行低分辨率从头相位确定的进展。
Acta Crystallogr D Struct Biol. 2016 Mar;72(Pt 3):446-53. doi: 10.1107/S2059798316003405. Epub 2016 Mar 1.
8
Ab initio structure determination of nanocrystals of organic pharmaceutical compounds by electron diffraction at room temperature using a Timepix quantum area direct electron detector.使用Timepix量子面积直接电子探测器在室温下通过电子衍射对有机药物化合物纳米晶体进行从头算结构测定。
Acta Crystallogr A Found Adv. 2016 Mar;72(Pt 2):236-42. doi: 10.1107/S2053273315022500. Epub 2016 Feb 5.
9
Structure of the toxic core of α-synuclein from invisible crystals.来自不可见晶体的α-突触核蛋白毒性核心结构。
Nature. 2015 Sep 24;525(7570):486-90. doi: 10.1038/nature15368. Epub 2015 Sep 9.
10
MicroED data collection and processing.微晶电子衍射(MicroED)数据收集与处理
Acta Crystallogr A Found Adv. 2015 Jul;71(Pt 4):353-60. doi: 10.1107/S2053273315010669. Epub 2015 Jul 1.