Laboratoire de Chimie des Processus Biologiques, Unité Mixte de Recherche 8229 CNRS, Collège de France, Université Pierre et Marie Curie, 75231 Paris cedex 05, France.
SOLEIL Synchrotron, L'Orme des Merisiers, 91198 Gif-sur-Yvette, France.
Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):7355-7360. doi: 10.1073/pnas.1700902114. Epub 2017 Jun 27.
Sulfur is present in several nucleosides within tRNAs. In particular, thiolation of the universally conserved methyl-uridine at position 54 stabilizes tRNAs from thermophilic bacteria and hyperthermophilic archaea and is required for growth at high temperature. The simple nonredox substitution of the C2-uridine carbonyl oxygen by sulfur is catalyzed by tRNA thiouridine synthetases called TtuA. Spectroscopic, enzymatic, and structural studies indicate that TtuA carries a catalytically essential [4Fe-4S] cluster and requires ATP for activity. A series of crystal structures shows that () the cluster is ligated by only three cysteines that are fully conserved, allowing the fourth unique iron to bind a small ligand, such as exogenous sulfide, and () the ATP binding site, localized thanks to a protein-bound AMP molecule, a reaction product, is adjacent to the cluster. A mechanism for tRNA sulfuration is suggested, in which the unique iron of the catalytic cluster serves to bind exogenous sulfide, thus acting as a sulfur carrier.
硫存在于 tRNA 中的几种核苷中。特别是,普遍保守的 54 位甲基尿嘧啶的硫代修饰稳定了嗜热细菌和超嗜热古菌的 tRNA,并且是在高温下生长所必需的。由称为 TtuA 的 tRNA 硫尿嘧啶合成酶催化的 C2-尿嘧啶羰基氧的简单非氧化还原取代。光谱、酶和结构研究表明,TtuA 携带催化必需的[4Fe-4S]簇,并且需要 ATP 才能发挥活性。一系列晶体结构表明,()簇仅由完全保守的三个半胱氨酸连接,允许第四个独特的铁结合一个小配体,如外源硫代硫酸盐,并且()ATP 结合位点,由于与蛋白结合的 AMP 分子(反应产物)而本地化,位于簇的附近。提出了一种 tRNA 硫代修饰的机制,其中催化簇的独特铁用于结合外源硫代硫酸盐,从而充当硫载体。