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气体水合物成核的自由能景观和分子途径。

Free energy landscape and molecular pathways of gas hydrate nucleation.

机构信息

Department of Civil and Environmental Engineering, George Washington University, Washington DC 20052, USA.

出版信息

J Chem Phys. 2016 Dec 7;145(21):211909. doi: 10.1063/1.4961241.

Abstract

Despite the significance of gas hydrates in diverse areas, a quantitative knowledge of hydrate formation at a molecular level is missing. The impediment to acquiring this understanding is primarily attributed to the stochastic nature and ultra-fine scales of nucleation events, posing a great challenge for both experiment and simulation to explore hydrate nucleation. Here we employ advanced molecular simulation methods, including forward flux sampling (FFS), p histogram analysis, and backward flux sampling, to overcome the limit of direct molecular simulation for exploring both the free energy landscape and molecular pathways of hydrate nucleation. First we test the half-cage order parameter (H-COP) which we developed for driving FFS, through conducting the p histogram analysis. Our results indeed show that H-COP describes well the reaction coordinates of hydrate nucleation. Through the verified order parameter, we then directly compute the free energy landscape for hydrate nucleation by combining both forward and backward flux sampling. The calculated stationary distribution density, which is obtained independently of nucleation theory, is found to fit well against the classical nucleation theory (CNT). Subsequent analysis of the obtained large ensemble of hydrate nucleation trajectories show that although on average, hydrate formation is facilitated by a two-step like mechanism involving a gradual transition from an amorphous to a crystalline structure, there also exist nucleation pathways where hydrate crystallizes directly, without going through the amorphous stage. The CNT-like free energy profile and the structural diversity suggest the existence of multiple active transition pathways for hydrate nucleation, and possibly also imply the near degeneracy in their free energy profiles among different pathways. Our results thus bring a new perspective to the long standing question of how hydrates crystallize.

摘要

尽管天然气水合物在许多领域都具有重要意义,但我们对其在分子水平上的形成过程仍缺乏定量认识。阻碍我们获得这方面知识的主要原因是成核事件的随机性质和超细微观尺度,这给实验和模拟研究水合物成核都带来了巨大的挑战。在这里,我们采用先进的分子模拟方法,包括正向通量采样(FFS)、p 直方图分析和反向通量采样,以克服直接分子模拟在探索水合物成核的自由能景观和分子途径方面的局限性。首先,我们通过进行 p 直方图分析来测试我们开发的用于驱动 FFS 的半笼有序参数(H-COP)。我们的结果确实表明,H-COP 很好地描述了水合物成核的反应坐标。通过验证的有序参数,我们然后通过结合正向和反向通量采样直接计算水合物成核的自由能景观。通过与经典成核理论(CNT)进行比较,我们发现所计算的自由能景观与独立于成核理论的固定分布密度吻合得很好。对获得的大量水合物成核轨迹的后续分析表明,尽管平均而言,水合物的形成通过涉及从无定形到结晶结构的逐渐转变的两步机制得到促进,但也存在水合物直接结晶而不经过无定形阶段的成核途径。CNT 样的自由能曲线和结构多样性表明,水合物成核存在多种活跃的转变途径,并且不同途径之间的自由能曲线可能存在近简并性。因此,我们的研究结果为水合物如何结晶这一长期存在的问题提供了新的视角。

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