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膜相场模型的弹性和动力学特性

Elastic and dynamic properties of membrane phase-field models.

作者信息

Lázaro Guillermo R, Pagonabarraga Ignacio, Hernández-Machado Aurora

机构信息

Martin Fisher School of Physics, Brandeis University, 02454, Waltham, MA, USA.

Departament de Fisica de la Matèria Condensada, Universitat de Barcelona, Av. Diagonal 645, E08028, Barcelona, Spain.

出版信息

Eur Phys J E Soft Matter. 2017 Sep;40(9):77. doi: 10.1140/epje/i2017-11566-8. Epub 2017 Sep 19.

DOI:10.1140/epje/i2017-11566-8
PMID:28917028
Abstract

Phase-field models have been extensively used to study interfacial phenomena, from solidification to vesicle dynamics. In this article, we analyze a phase-field model that captures the relevant physical features that characterize biological membranes. We show that the Helfrich theory of elasticity of membranes can be applied to phase-field models, allowing to derive the expressions of the stress tensor, lateral stress profile and elastic moduli. We discuss the relevance and interpretations of these magnitudes from a phase-field perspective. Taking the sharp-interface limit we show that the membrane macroscopic equilibrium equation can be derived from the equilibrium condition of the phase-field interface. We also study two dynamic models that describe the behaviour of a membrane. From the study of the relaxational behaviour of the membrane we characterize the relevant dynamics of each model, and discuss their applications.

摘要

相场模型已被广泛用于研究界面现象,从凝固到囊泡动力学。在本文中,我们分析了一个相场模型,该模型捕捉了表征生物膜的相关物理特征。我们表明,膜的赫尔弗里希弹性理论可以应用于相场模型,从而能够推导出应力张量、横向应力分布和弹性模量的表达式。我们从相场的角度讨论了这些量的相关性和解释。取尖锐界面极限,我们表明膜的宏观平衡方程可以从相场界面的平衡条件推导出来。我们还研究了两个描述膜行为的动力学模型。通过对膜的弛豫行为的研究,我们表征了每个模型的相关动力学,并讨论了它们的应用。

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Elastic and dynamic properties of membrane phase-field models.膜相场模型的弹性和动力学特性
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本文引用的文献

1
Phase-field theories for mathematical modeling of biological membranes.用于生物膜数学建模的相场理论。
Chem Phys Lipids. 2015 Jan;185:46-60. doi: 10.1016/j.chemphyslip.2014.08.001. Epub 2014 Sep 20.
2
Rheology of red blood cells under flow in highly confined microchannels: I. effect of elasticity.高度受限微通道中流动状态下红细胞的流变学:I. 弹性效应
Soft Matter. 2014 Oct 7;10(37):7195-206. doi: 10.1039/c4sm00894d.
3
Lipid bilayer and cytoskeletal interactions in a red blood cell.脂质双层与血影蛋白在红细胞中的相互作用。
染色质的中尺度液体模型概括了真核生物的核秩序。
Biophys J. 2020 May 5;118(9):2130-2140. doi: 10.1016/j.bpj.2019.09.013. Epub 2019 Sep 17.
Proc Natl Acad Sci U S A. 2013 Aug 13;110(33):13356-61. doi: 10.1073/pnas.1311827110. Epub 2013 Jul 29.
4
Gaussian curvature elasticity determined from global shape transformations and local stress distributions: a comparative study using the MARTINI model.从全局形状变换和局部应力分布确定的高斯曲率弹性:使用 MARTINI 模型的比较研究。
Faraday Discuss. 2013;161:365-82; discussion 419-59. doi: 10.1039/c2fd20087b.
5
Estimation of the bending rigidity and spontaneous curvature of fluid membranes in simulations.模拟中流体膜弯曲刚度和自发曲率的估计
Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Sep;84(3 Pt 1):031926. doi: 10.1103/PhysRevE.84.031926. Epub 2011 Sep 27.
6
Measurement of red blood cell mechanics during morphological changes.测量形态变化过程中的红细胞力学性质。
Proc Natl Acad Sci U S A. 2010 Apr 13;107(15):6731-6. doi: 10.1073/pnas.0909533107. Epub 2010 Mar 29.
7
Lateral pressure profiles in lipid monolayers.脂质单层中的侧向压力分布。
Faraday Discuss. 2010;144:393-409; discussion 445-81. doi: 10.1039/b905647e.
8
Thermodynamically consistent picture of the phase-field model of vesicles: elimination of the surface tension.囊泡相场模型的热力学自洽图景:表面张力的消除
Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Oct;78(4 Pt 1):041903. doi: 10.1103/PhysRevE.78.041903. Epub 2008 Oct 2.
9
Polymer-induced tubulation in lipid vesicles.聚合物诱导脂质囊泡形成微管。
Phys Rev Lett. 2008 Apr 18;100(15):158103. doi: 10.1103/PhysRevLett.100.158103. Epub 2008 Apr 17.
10
Model for curvature-driven pearling instability in membranes.曲率驱动的膜珠状不稳定性模型。
Phys Rev Lett. 2007 Aug 24;99(8):088101. doi: 10.1103/PhysRevLett.99.088101. Epub 2007 Aug 21.