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用于担子菌代谢通量分析的最低生长培养基。

A minimal growth medium for the basidiomycete for metabolic flux analysis.

作者信息

Fraatz Marco A, Naeve Stefanie, Hausherr Vanessa, Zorn Holger, Blank Lars M

机构信息

Institute of Food Chemistry and Food Biotechnology, Justus Liebig University Giessen, Heinrich-Buff-Ring 58, Giessen, 35392 Germany.

Laboratory of Technical Biochemistry, TU Dortmund, Dortmund, 44221 Germany.

出版信息

Fungal Biol Biotechnol. 2014 Dec 5;1:9. doi: 10.1186/s40694-014-0009-4. eCollection 2014.

Abstract

BACKGROUND

secretes a huge enzymatic repertoire including hydrolytic and oxidative enzymes and is an example for higher basidiomycetes being interesting for biotechnology. The complex growth media used for submerged cultivation limit basic physiological analyses of this group of organisms. Using undefined growth media, only little insights into the operation of central carbon metabolism and biomass formation, , the interplay of catabolic and anabolic pathways, can be gained.

RESULTS

The development of a chemically defined growth medium allowed rapid growth of in submerged cultures. As grew extremely slow in salt medium, the co-utilization of amino acids using C-labelled glucose was investigated by gas chromatography-mass spectrometry (GC-MS) analysis. While some amino acids were synthesized up to 90% from glucose ( alanine), asparagine and/or aspartate were predominantly taken up from the medium. With this information in hand, a defined yeast free salt medium containing aspartate and ammonium nitrate as a nitrogen source was developed. The observed growth rates of were well comparable with those previously published for complex media. Importantly, fast growth could be observed for 4 days at least, up to cell wet weights (CWW) of 400 g L. The chemically defined medium was used to carry out a C-based metabolic flux analysis, and the reactions rates in the central carbon metabolism of were investigated. The results revealed a highly respiratory metabolism with high fluxes through the pentose phosphate pathway and TCA cycle.

CONCLUSIONS

The presented chemically defined growth medium enables researchers to study the metabolism of , significantly enlarging the analytical capabilities. Detailed studies on the production of extracellular enzymes and of secondary metabolites of may be designed based on the reported data.

摘要

背景

[某种生物]分泌大量酶类,包括水解酶和氧化酶,是对生物技术具有重要意义的高等担子菌的一个实例。用于深层培养的复杂生长培养基限制了对这类生物的基础生理分析。使用成分不明确的生长培养基,对中心碳代谢和生物量形成(即分解代谢和合成代谢途径的相互作用)的了解非常有限。

结果

化学成分明确的生长培养基的开发使[某种生物]在深层培养中能够快速生长。由于[某种生物]在盐培养基中生长极其缓慢,因此通过气相色谱 - 质谱(GC - MS)分析研究了利用碳标记葡萄糖对氨基酸的共利用情况。虽然一些氨基酸高达90%由葡萄糖合成(如丙氨酸),但天冬酰胺和/或天冬氨酸主要从培养基中摄取。基于这些信息,开发了一种以天冬氨酸和硝酸铵作为氮源的明确的无酵母盐培养基。观察到的[某种生物]生长速率与先前发表的复杂培养基培养结果相当。重要的是,至少在4天内可观察到快速生长,细胞湿重可达400 g·L。利用化学成分明确的培养基进行了基于碳的代谢通量分析,并研究了[某种生物]中心碳代谢中的反应速率。结果显示其具有高度的呼吸代谢,通过磷酸戊糖途径和三羧酸循环的通量很高。

结论

所呈现的化学成分明确的生长培养基使研究人员能够研究[某种生物]的代谢,显著扩展了分析能力。基于所报道的数据,可设计关于[某种生物]细胞外酶和次生代谢产物生产的详细研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28d7/5611629/3e21d68d8ca0/40694_2014_Article_9_Fig1_HTML.jpg

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