Department of Physics, St. Petersburg State University, Russia.
Department of Genetics and Biotechnology, St. Petersburg State University, Russia; The Laboratory of Amyloid Biology, St. Petersburg State University, Russia.
J Struct Biol. 2018 Jan;201(1):5-14. doi: 10.1016/j.jsb.2017.10.006. Epub 2017 Oct 25.
Prion and some other incurable human neurodegenerative diseases are associated with misfolding of specific proteins, followed by the formation of amyloids. Despite the widespread usage of the transmission electron and of the atomic force microscopy for studing such amyloids, many related methodological issues still have not been studied until now. Here, we consider one of the first amyloids found in Saccharomyces cerevisiae yeast, i.e. Sup35NMp, to study the adsorption of monomeric protein and its fibrils on the surface of mica, silica, gold and on formvar film. Comparison of linear characteristics of these units calculated by processing of images obtained by the atomic force, transmission and scanning electron microscopy was carried out. The minimal number of measurements of fibril diameters to obtain the values in a given confidence interval were determined. We investigated the film formed by monomeric protein on mica surface, which veiled some morphology features of fibrils. Besides, we revealed that parts of the Sup35NMp excluded from the fibril core can form a wide "coat". The length of the protein forming the core of the fibrils was estimated.
朊病毒和一些其他无法治愈的人类神经退行性疾病与特定蛋白质的错误折叠有关,随后形成淀粉样蛋白。尽管传输电子显微镜和原子力显微镜被广泛用于研究这些淀粉样蛋白,但直到现在,许多相关的方法学问题仍未得到研究。在这里,我们研究了在酿酒酵母酵母中发现的第一种淀粉样蛋白Sup35NMp,以研究单体蛋白及其原纤维在云母、二氧化硅、金和 Formvar 膜表面的吸附。通过对原子力显微镜、透射电子显微镜和扫描电子显微镜获得的图像进行处理,比较了这些单元的线性特征。确定了获得给定置信区间内值所需的原纤维直径测量的最小数量。我们研究了单体蛋白在云母表面形成的薄膜,该薄膜掩盖了原纤维的一些形态特征。此外,我们发现部分从原纤维核心中排除的 Sup35NMp 可以形成一个宽的“外套”。估计了形成原纤维核心的蛋白质的长度。