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英吉利海峡的古簇虫纲动物再探讨:关于硒簇虫属物种的新分子数据,包括早期描述的物种和新物种以及系统发育关系的不确定性

Archigregarines of the English Channel revisited: New molecular data on Selenidium species including early described and new species and the uncertainties of phylogenetic relationships.

作者信息

Rueckert Sonja, Horák Aleš

机构信息

School of Applied Sciences, Edinburgh Napier University, Edinburgh, United Kingdom.

Biology Centre of CAS, Institute of Parasitology, České Budějovice, Czech Republic.

出版信息

PLoS One. 2017 Nov 3;12(11):e0187430. doi: 10.1371/journal.pone.0187430. eCollection 2017.

Abstract

BACKGROUND

Gregarines represent an important transition step from free-living predatory (colpodellids s.l.) and/or photosynthetic (Chromera and Vitrella) apicomplexan lineages to the most important pathogens, obligate intracellular parasites of humans and domestic animals such as coccidians and haemosporidians (Plasmodium, Toxoplasma, Eimeria, Babesia, etc.). While dozens of genomes of other apicomplexan groups are available, gregarines are barely entering the molecular age. Among the gregarines, archigregarines possess a unique mixture of ancestral (myzocytosis) and derived (lack of apicoplast, presence of subpellicular microtubules) features.

METHODOLOGY/PRINCIPAL FINDINGS: In this study we revisited five of the early-described species of the genus Selenidium including the type species Selenidium pendula, with special focus on surface ultrastructure and molecular data. We were also able to describe three new species within this genus. All species were characterized at morphological (light and scanning electron microscopy data) and molecular (SSU rDNA sequence data) levels. Gregarine specimens were isolated from polychaete hosts collected from the English Channel near the Station Biologique de Roscoff, France: Selenidium pendula from Scolelepis squamata, S. hollandei and S. sabellariae from Sabellaria alveolata, S. sabellae from Sabella pavonina, Selenidium fallax from Cirriformia tentaculata, S. spiralis sp. n. and S. antevariabilis sp. n. from Amphitritides gracilis, and S. opheliae sp. n. from Ophelia roscoffensis. Molecular phylogenetic analyses of these data showed archigregarines clustering into five separate clades and support previous doubts about their monophyly.

CONCLUSIONS/SIGNIFICANCE: Our phylogenies using the extended gregarine sampling show that the archigregarines are indeed not monophyletic with one strongly supported clade of Selenidium sequences around the type species S. pendula. We suggest the revision of the whole archigregarine taxonomy with only the species within this clade remaining in the genus Selenidium, while the other species should be moved into newly erected genera. However, the SSU rDNA phylogenies show very clearly that the tree topology and therefore the inferred relationships within and in between clades are unstable and such revision would be problematic without additional sequence data.

摘要

背景

簇虫代表了从自由生活的捕食性(广义的柱顶虫)和/或光合性(色虫属和璃虫属)顶复门谱系到最重要的病原体、人类和家畜专性细胞内寄生虫(如球虫和血孢子虫,如疟原虫、弓形虫、艾美耳球虫、巴贝斯虫等)的一个重要过渡阶段。虽然已有其他顶复门类群的数十个基因组,但簇虫才刚刚进入分子时代。在簇虫中,原簇虫具有祖先特征(噬胞作用)和衍生特征(缺乏质体、存在表膜下微管)的独特组合。

方法/主要发现:在本研究中,我们重新审视了早期描述的硒簇虫属的五个物种,包括模式种垂硒簇虫,特别关注其表面超微结构和分子数据。我们还能够描述该属内的三个新物种。所有物种均在形态学(光学和扫描电子显微镜数据)和分子(小亚基核糖体DNA序列数据)水平上进行了表征。簇虫标本从法国罗斯科夫生物站附近英吉利海峡采集的多毛纲宿主中分离得到:从鳞沙蚕中分离出垂硒簇虫,从蜂窝沙蚕中分离出荷兰硒簇虫和沙贝硒簇虫,从孔雀沙蚕中分离出沙贝硒簇虫,从触手盘管虫中分离出伪硒簇虫,从优美 Amphitritides 中分离出螺旋硒簇虫新种和可变前硒簇虫新种,从罗斯科夫欧斐利娅中分离出欧斐利娅硒簇虫新种。对这些数据的分子系统发育分析表明,原簇虫聚为五个独立的分支,并支持了之前对其单系性的质疑。

结论/意义:我们使用扩展的簇虫样本进行的系统发育分析表明,原簇虫确实不是单系的,在模式种垂硒簇虫周围有一个得到有力支持的硒簇虫序列分支。我们建议修订整个原簇虫分类法,仅将该分支内的物种保留在硒簇虫属中,而其他物种应移入新建立的属中。然而,小亚基核糖体DNA系统发育分析非常清楚地表明,树形拓扑结构以及因此推断的分支内和分支间的关系是不稳定的,没有额外的序列数据,这种修订将存在问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b13/5669490/e5efae10274b/pone.0187430.g001.jpg

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