Biomedical Informatics Research Laboratory, Department of Computer and Information Sciences, Pakistan Institute of Engineering and Applied Sciences, PO Nilore, Islamabad, Pakistan.
Department of Computer Science, University of Warwick, Coventry, UK.
J Med Syst. 2017 Nov 21;42(1):7. doi: 10.1007/s10916-017-0863-8.
Nuclei detection in histology images is an essential part of computer aided diagnosis of cancers and tumors. It is a challenging task due to diverse and complicated structures of cells. In this work, we present an automated technique for detection of cellular nuclei in hematoxylin and eosin stained histopathology images. Our proposed approach is based on kernelized correlation filters. Correlation filters have been widely used in object detection and tracking applications but their strength has not been explored in the medical imaging domain up till now. Our experimental results show that the proposed scheme gives state of the art accuracy and can learn complex nuclear morphologies. Like deep learning approaches, the proposed filters do not require engineering of image features as they can operate directly on histopathology images without significant preprocessing. However, unlike deep learning methods, the large-margin correlation filters developed in this work are interpretable, computationally efficient and do not require specialized or expensive computing hardware.
A cloud based webserver of the proposed method and its python implementation can be accessed at the following URL: http://faculty.pieas.edu.pk/fayyaz/software.html#corehist .
在组织学图像中检测细胞核是癌症和肿瘤计算机辅助诊断的重要组成部分。由于细胞的结构多种多样且复杂,因此这是一项具有挑战性的任务。在这项工作中,我们提出了一种用于检测苏木精和伊红染色组织病理学图像中细胞核的自动化技术。我们提出的方法基于核相关滤波器。相关滤波器已广泛应用于目标检测和跟踪应用中,但直到现在,它们在医学成像领域的优势尚未得到探索。我们的实验结果表明,所提出的方案具有最先进的准确性,可以学习复杂的核形态。与深度学习方法一样,所提出的滤波器不需要对图像特征进行工程设计,因为它们可以直接在组织病理学图像上运行,而无需进行大量预处理。但是,与深度学习方法不同,本文开发的大间隔相关滤波器是可解释的、计算效率高的,并且不需要专门的或昂贵的计算硬件。
可以通过以下网址访问所提出方法的基于云的网络服务器及其 Python 实现:http://faculty.pieas.edu.pk/fayyaz/software.html#corehist 。