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节节麦中CCT家族的特征分析及基因表达分析

Characterization of the CCT family and analysis of gene expression in Aegilops tauschii.

作者信息

Zheng Xingwei, Li Xiaohua, Ge Chuan, Chang Jianzhong, Shi Mengmeng, Chen Jianli, Qiao Linyi, Chang Zhijian, Zheng Jun, Zhang Jiancheng

机构信息

Institute of Wheat Research, Shanxi Academy of Agricultural Sciences, Linfen, China.

Institute of Crop Science, Shanxi Academy of Agricultural Sciences/Shanxi Key Laboratory of Crop Genetics and Molecular Improvement, Taiyuan, China.

出版信息

PLoS One. 2017 Dec 8;12(12):e0189333. doi: 10.1371/journal.pone.0189333. eCollection 2017.

Abstract

Flowering is crucial for reproductive success in flowering plant. The CCT domain-containing genes widely participate in the regulation of flowering process in various plant species. So far, the CCT family in common wheat is largely unknown. Here, we characterized the structure, organization, molecular evolution and expression of the CCT genes in Aegilops tauschii, which is the D genome donor of hexaploid wheat. Twenty-six CCT genes (AetCCT) were identified from the full genome of A. tauschii and these genes were distributed on all 7 chromosomes. Phylogenetic analysis classified these AetCCT genes into 10 subgroups. Thirteen AetCCT members in group A, C, H and G achieved rapid evolution based on evolutionary rate analysis. The AetCCT genes respond to different exogenous hormones and abiotic treatments, the expression of AetCCT4, 7, 8, 11, 12, 16, 17, 19, 21 and 22 showed a significant 24 h rhythm. This study may provide a reference for common wheat's evolution, domestication and evolvement rules, and also help us to understand the ecological adaptability of A. tauschii.

摘要

开花对于开花植物的繁殖成功至关重要。含CCT结构域的基因广泛参与各种植物物种开花过程的调控。到目前为止,普通小麦中的CCT家族在很大程度上还不为人知。在这里,我们对节节麦(六倍体小麦D基因组的供体)中CCT基因的结构、组织、分子进化和表达进行了表征。从节节麦的全基因组中鉴定出26个CCT基因(AetCCT),这些基因分布在所有7条染色体上。系统发育分析将这些AetCCT基因分为10个亚组。基于进化速率分析,A、C、H和G组中的13个AetCCT成员实现了快速进化。AetCCT基因对不同的外源激素和非生物处理有响应,AetCCT4、7、8、11、12、16、17、19、21和22的表达呈现出显著的24小时节律。本研究可能为普通小麦的进化、驯化和演化规律提供参考,也有助于我们了解节节麦的生态适应性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d525/5722339/213b67f4c377/pone.0189333.g001.jpg

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