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在原生动物中肌球蛋白基因的进化分析表明其经历了扩张、二次丢失和新功能化的历史。

Evolutionary analyses of myosin genes in trypanosomatids show a history of expansion, secondary losses and neofunctionalization.

机构信息

Laboratório de Genômica Funcional, Instituto Carlos Chagas- ICC/Fiocruz-, PR, Curitiba, 81350-010, Brazil.

Programa de Pós-graduação em Biociências e Biotecnologia - ICC/Fiocruz-, PR, Curitiba, 81350-010, Brazil.

出版信息

Sci Rep. 2018 Jan 22;8(1):1376. doi: 10.1038/s41598-017-18865-y.

Abstract

Myosins are motor proteins that comprise a large and diversified family important for a broad range of functions. Two myosin classes, I and XIII, were previously assigned in Trypanosomatids, based mainly on the studies of Trypanosoma cruzi, T. brucei and Leishmania major, and important human pathogenic species; seven orphan myosins were identified in T. cruzi. Our results show that the great variety of T. cruzi myosins is also present in some closely related species and in Bodo saltans, a member of an early divergent branch of Kinetoplastida. Therefore, these myosins should no longer be considered "orphans". We proposed the classification of a kinetoplastid-specific myosin group into a new class, XXXVI. Moreover, our phylogenetic data suggest that a great repertoire of myosin genes was present in the last common ancestor of trypanosomatids and B. saltans, mainly resulting from several gene duplications. These genes have since been predominantly maintained in synteny in some species, and secondary losses explain the current distribution. We also found two interesting genes that were clearly derived from myosin genes, demonstrating that possible redundant or useless genes, instead of simply being lost, can serve as raw material for the evolution of new genes and functions.

摘要

肌球蛋白是一类重要的、功能广泛的大型和多样化的马达蛋白家族。基于对克氏锥虫、布氏锥虫和利什曼原虫等重要的人类病原体以及一些亲缘关系密切的物种的研究,先前在原生动物中已鉴定出两类肌球蛋白,即 I 类和 XIII 类;在克氏锥虫中还鉴定出了 7 个孤儿肌球蛋白。我们的研究结果表明,克氏锥虫肌球蛋白的多样性也存在于一些亲缘关系密切的物种和博代氏属的波多氏变形体中,博代氏属属于动基体门中一个早期分支的成员。因此,这些肌球蛋白不应再被视为“孤儿”。我们建议将动基体门特异性肌球蛋白组分类为一个新的 XXXVI 类。此外,我们的系统发育数据表明,在锥虫和博代氏属的最后共同祖先中存在大量肌球蛋白基因,主要源于多次基因复制。这些基因在某些物种中一直保持着共线性,而二次丢失则解释了目前的分布情况。我们还发现了两个有趣的基因,它们显然是由肌球蛋白基因衍生而来的,这表明可能冗余或无用的基因,而不是简单地丢失,可作为进化产生新基因和功能的原始材料。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44fc/5778035/40634d110bb1/41598_2017_18865_Fig1_HTML.jpg

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