Sarkar Shubhra, Ramanathan N, Sundararajan K
Materials Chemistry and Metal Fuel Cycle Group , Indira Gandhi Centre for Atomic Research , Kalpakkam 603 102 , India.
Homi Bhabha National Institute , Kalpakkam 603 102 , India.
J Phys Chem A. 2018 Mar 8;122(9):2445-2460. doi: 10.1021/acs.jpca.8b00023. Epub 2018 Feb 27.
Hydrogen-bonded interactions of pyrrole with water and methanol have been studied using matrix isolation infrared spectroscopy and compared with the calculation performed on dimethyl ether. Computations carried out at MP2/aug-cc-pVDZ level of theory yielded two minima for the pyrrole-water and pyrrole-methanol complexes. The global and local minima correspond to the N-H···O and O-H···π complexes, respectively, where the N-H group of pyrrole interacts with oxygen of water/methanol and O-H of water and methanol interacts with the π cloud of pyrrole. Computations performed on the pyrrole-dimethyl ether gave only N-H···O type complex. From the experimental vibrational wavenumber shifts in the N-H stretching and N-H bending modes of pyrrole, as well as in the O-H stretching modes of water and methanol, the 1:1 N-H···O complexes were discerned. The strength of the N-H···O hydrogen bond and the corresponding shift in the N-H stretching vibrational wavenumbers increases in the order pyrrole-water < pyrrole-methanol < pyrrole-dimethyl ether, where a proton is successively replaced by a methyl group. Apart from the 1:1 complexes, higher clusters of 2:1 and 1:2 pyrrole-water and pyrrole-methanol complexes were also generated in N matrix. Atoms in molecules and natural bond orbital analyses were carried out at the MP2/aug-cc-pVDZ level to understand the nature of interaction in the 1:1 pyrrole-water, pyrrole-methanol and pyrrole-dimethyl ether complexes.
利用基质隔离红外光谱研究了吡咯与水和甲醇的氢键相互作用,并与对二甲醚进行的计算结果进行了比较。在MP2/aug-cc-pVDZ理论水平上进行的计算得出了吡咯-水和吡咯-甲醇配合物的两个最小值。全局最小值和局部最小值分别对应于N-H···O和O-H···π配合物,其中吡咯的N-H基团与水/甲醇的氧相互作用,水和甲醇的O-H与吡咯的π云相互作用。对吡咯-二甲醚进行的计算只得到了N-H···O型配合物。从吡咯的N-H伸缩和N-H弯曲模式以及水和甲醇的O-H伸缩模式的实验振动波数位移中,可以识别出1:1的N-H···O配合物。N-H···O氢键的强度以及N-H伸缩振动波数的相应位移按吡咯-水<吡咯-甲醇<吡咯-二甲醚的顺序增加,其中质子依次被甲基取代。除了1:1配合物外,在N基质中还生成了2:1和1:2的吡咯-水和吡咯-甲醇配合物的更高聚集体。在MP2/aug-cc-pVDZ水平上进行了分子中的原子和自然键轨道分析,以了解1:1的吡咯-水、吡咯-甲醇和吡咯-二甲醚配合物中的相互作用性质。