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基于形态变异和ISSR分子标记对伊朗狗牙根(Cynodon dactylon (L.) Pers.)种质资源多样性的评估,以筛选和引进耐寒基因型。

Evaluation of Diversity Based on Morphological Variabilities and ISSR Molecular Markers in Iranian Cynodon dactylon (L.) Pers. Accessions to Select and Introduce Cold-Tolerant Genotypes.

作者信息

Akbari M, Salehi H, Niazi A

机构信息

Department of Horticultural Science, School of Agriculture, Shiraz University, Shiraz, Iran.

Institute of Biotechnology, Shiraz University, Shiraz, Iran.

出版信息

Mol Biotechnol. 2018 Apr;60(4):259-270. doi: 10.1007/s12033-018-0068-5.

Abstract

The main goals of the present study were to screen Iranian common bermudagrasses to find cold-tolerant accessions and evaluate their genetic and morphological variabilities. In this study, 49 accessions were collected from 18 provinces of Iran. One foreign cultivar of common bermudagrass was used as control. Morphological variation was evaluated based on 14 morphological traits to give information about taxonomic position of Iranian common bermudagrass. Data from morphological traits were evaluated to categorize all accessions as either cold sensitive or tolerant using hierarchical clustering with Ward's method in SPSS software. Inter-Simple Sequence Repeat (ISSR) primers were employed to evaluate genetic variability of accessions. The results of our taxonomic investigation support the existence of two varieties of Cynodon dactylon in Iran: var. dactylon (hairless plant) and var. villosous (plant with hairs at leaf underside and/or upper side surfaces or exterior surfaces of sheath). All 15 primers amplified and gave clear and highly reproducible DNA fragments. In total, 152 fragments were produced, of which 144 (94.73%) being polymorphic. The polymorphic information content (PIC) values ranged from 0.700 to 0.928. The average PIC value obtained with 15 ISSR primers was 0.800, which shows that all primers were informative. Probability identity (PI) and discriminating power between all primers ranged from 0.029 to 0.185 and 0.815 to 0.971, respectively. Genetic data were converted into a binary data matrix. NTSYS software was used for data analysis. Clustering was done by the unweighted pair-group method with arithmetic averages and principle coordinate analysis, separated the accessions into six main clusters. According to both morphological and genetic diversity investigations of accessions, they can be clustered into three groups: cold sensitive, cold semi-tolerant, and cold tolerant. The most cold-tolerant accessions were: Taft, Malayear, Gorgan, Safashahr, Naein, Aligoudarz, and the foreign cultivar. This study may provide useful information for further breeding programs on common bermudagrass. Selected genotypes can be evaluated for other abiotic stresses such as drought and salinity.

摘要

本研究的主要目标是筛选伊朗普通狗牙根,以找到耐寒种质并评估其遗传和形态变异性。在本研究中,从伊朗18个省份收集了49份种质。使用一份国外普通狗牙根品种作为对照。基于14个形态性状评估形态变异,以提供有关伊朗普通狗牙根分类地位的信息。利用SPSS软件中的Ward法进行层次聚类,对形态性状数据进行评估,将所有种质分类为冷敏感型或耐寒型。采用简单序列重复区间(ISSR)引物评估种质的遗传变异性。我们的分类学调查结果支持伊朗存在两种狗牙根变种:狗牙根变种(无毛植株)和柔毛变种(叶下侧和/或上表面或叶鞘外表面有毛的植株)。所有15条引物均能扩增出清晰且高度可重复的DNA片段。总共产生了152个片段,其中144个(94.73%)为多态性片段。多态信息含量(PIC)值范围为0.700至0.928。15条ISSR引物获得的平均PIC值为0.800,这表明所有引物均具有信息性。所有引物之间的概率同一性(PI)和鉴别力分别为0.029至0.185和0.815至0.971。遗传数据被转换为二元数据矩阵。使用NTSYS软件进行数据分析。通过非加权算术平均法和主坐标分析进行聚类,将种质分为六个主要类群。根据种质的形态和遗传多样性调查,它们可分为三组:冷敏感型、冷半耐受型和耐寒型。最耐寒的种质有:塔夫脱、马勒亚尔、戈尔甘、萨法沙赫尔、奈因、阿里古达尔兹以及国外品种。本研究可为普通狗牙根的进一步育种计划提供有用信息。可对所选基因型进行其他非生物胁迫如干旱和盐胁迫的评估。

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