从国际空间站种植的感染百日草属植物中培养的两株尖孢镰刀菌分离株的基因组序列草图
Draft Genome Sequences of Two Fusarium oxysporum Isolates Cultured from Infected Zinnia hybrida Plants Grown on the International Space Station.
作者信息
Urbaniak Camilla, Massa Gioia, Hummerick Mary, Khodadad Christina, Schuerger Andrew, Venkateswaran Kasthuri
机构信息
Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA.
Exploration Research and Technology Programs, NASA, Kennedy Space Center, Florida, USA.
出版信息
Genome Announc. 2018 May 17;6(20):e00326-18. doi: 10.1128/genomeA.00326-18.
Abstract
Here, we present the whole-genome sequences of two isolates cultured from infected plants that were grown onboard the International Space Station (ISS).
摘要
在此，我们展示了从在国际空间站（ISS）上种植的受感染植物中培养的两个分离株的全基因组序列。
相似文献
1
Draft Genome Sequences of Two Fusarium oxysporum Isolates Cultured from Infected Zinnia hybrida Plants Grown on the International Space Station.
Genome Announc. 2018 May 17;6(20):e00326-18. doi: 10.1128/genomeA.00326-18.
2
as an Opportunistic Fungal Pathogen on Plants Grown on board the International Space Station.
Astrobiology. 2021 Sep;21(9):1029-1048. doi: 10.1089/ast.2020.2399. Epub 2021 Apr 29.
3
Diagnosing an Opportunistic Fungal Pathogen on Spaceflight-Grown Plants Using the MinION Sequencing Platform.
Astrobiology. 2022 Jan;22(1):1-6. doi: 10.1089/ast.2021.0049. Epub 2021 Nov 18.
4
Genomic Characterization and Virulence Potential of Two Isolates Cultured from the International Space Station.
mSystems. 2019 Mar 19;4(2). doi: 10.1128/mSystems.00345-18. eCollection 2019 Mar-Apr.
5
First Report of Fusarium oxysporum on Sweet Pepper Seedlings in Almería, Spain.
Plant Dis. 2014 Oct;98(10):1435. doi: 10.1094/PDIS-04-14-0365-PDN.
6
First Report of Fusarium Wilt of Basil Caused by Fusarium oxysporum f. sp. basilici in Argentina.
Plant Dis. 2014 Oct;98(10):1432. doi: 10.1094/PDIS-03-14-0243-PDN.
7
First Report of Fusarium Wilt on Eremophila spp. Caused by Fusarium oxysporum in Italy.
Plant Dis. 2010 Dec;94(12):1509. doi: 10.1094/PDIS-08-10-0597.
8
Specific PCR detection of Fusarium oxysporum f. sp. raphani: a causal agent of Fusarium wilt on radish plants.
Lett Appl Microbiol. 2017 Aug;65(2):133-140. doi: 10.1111/lam.12761. Epub 2017 Jul 3.
9
Incidence of Fusarium oxysporum f. sp. lycopersici Races in Tomato in Sinaloa, Mexico.
Plant Dis. 2010 Nov;94(11):1376. doi: 10.1094/PDIS-04-10-0255.
10
First Report of Fusarium Yellows of Sugar Beet Caused by Fusarium oxysporum in Michigan.
Plant Dis. 2006 Dec;90(12):1554. doi: 10.1094/PD-90-1554B.
引用本文的文献
1
Phylogenomics, phenotypic, and functional traits of five novel (Earth-derived) bacterial species isolated from the International Space Station and their prevalence in metagenomes.
Sci Rep. 2023 Nov 6;13(1):19207. doi: 10.1038/s41598-023-44172-w.
2
Phylogenetic affiliations and genomic characterization of novel bacterial species and their abundance in the International Space Station.
Res Sq. 2023 Jul 6:rs.3.rs-3126314. doi: 10.21203/rs.3.rs-3126314/v1.
3
Comparative genomic analysis of sp. nov. isolated from the International Space Station.
Front Microbiol. 2023 Jun 15;14:1166013. doi: 10.3389/fmicb.2023.1166013. eCollection 2023.
4
Microbial applications for sustainable space exploration beyond low Earth orbit.
NPJ Microgravity. 2023 Jun 21;9(1):47. doi: 10.1038/s41526-023-00285-0.
5
Draft Genome and Biological Characteristics of and Causing Black Rot in .
Int J Mol Sci. 2023 Feb 25;24(5):4545. doi: 10.3390/ijms24054545.
6
Simulated Microgravity Created Using a Random Positioning Machine Induces Changes in the Physiology of the Species Complex.
Microorganisms. 2022 Nov 16;10(11):2270. doi: 10.3390/microorganisms10112270.
7
Voriconazole Treatment Induces a Conserved Sterol/Pleiotropic Drug Resistance Regulatory Network, including an Alternative Ergosterol Biosynthesis Pathway, in the Clinically Important FSSC Species, .
J Fungi (Basel). 2022 Oct 12;8(10):1070. doi: 10.3390/jof8101070.
8
Morphology, Phenotype, and Molecular Identification of Clinical and Environmental Species Complex Isolates from Malaysia.
J Fungi (Basel). 2022 Aug 11;8(8):845. doi: 10.3390/jof8080845.
9
Population genomics reveals historical and ongoing recombination in the species complex.
Stud Mycol. 2021 Dec 17;99:100132. doi: 10.1016/j.simyco.2021.100132. eCollection 2021 Jun.
10
Dynamic changes in rhizosphere fungi in different developmental stages of wheat in a confined and isolated environment.
Appl Microbiol Biotechnol. 2022 Jan;106(1):441-453. doi: 10.1007/s00253-021-11698-w. Epub 2021 Dec 6.
本文引用的文献
1
Fusarium oxysporum and the Fusarium Wilt Syndrome.
Annu Rev Phytopathol. 2017 Aug 4;55:23-39. doi: 10.1146/annurev-phyto-080615-095919. Epub 2017 May 10.
2
Draft Genome Sequences of Several Fungal Strains Selected for Exposure to Microgravity at the International Space Station.
Genome Announc. 2017 Apr 13;5(15):e01602-16. doi: 10.1128/genomeA.01602-16.
3
Races of the Celery Pathogen Fusarium oxysporum f. sp. apii Are Polyphyletic.
Phytopathology. 2017 Apr;107(4):463-473. doi: 10.1094/PHYTO-04-16-0174-R. Epub 2017 Feb 27.
4
Effector profiles distinguish formae speciales of Fusarium oxysporum.
Environ Microbiol. 2016 Nov;18(11):4087-4102. doi: 10.1111/1462-2920.13445. Epub 2016 Jul 29.
5
ABySS: a parallel assembler for short read sequence data.
Genome Res. 2009 Jun;19(6):1117-23. doi: 10.1101/gr.089532.108. Epub 2009 Feb 27.
6
Genetic diversity of human pathogenic members of the Fusarium oxysporum complex inferred from multilocus DNA sequence data and amplified fragment length polymorphism analyses: evidence for the recent dispersion of a geographically widespread clonal lineage and nosocomial origin.
J Clin Microbiol. 2004 Nov;42(11):5109-20. doi: 10.1128/JCM.42.11.5109-5120.2004.
7
Opportunistic fusarial infections in humans.
Eur J Clin Microbiol Infect Dis. 1995 Sep;14(9):741-54. doi: 10.1007/BF01690988.
Zotero 插件