Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, 02138, USA.
Howard Hughes Medical Institute, Harvard University, Cambridge, MA, 02138, USA.
Nat Commun. 2018 Jun 5;9(1):2184. doi: 10.1038/s41467-018-04580-3.
Programmable nucleases can introduce precise changes to genomic DNA through homology-directed repair (HDR). Unfortunately, HDR is largely restricted to mitotic cells, and is typically accompanied by an excess of stochastic insertions and deletions (indels). Here we present an in vivo base editing strategy that addresses these limitations. We use nuclease-free base editing to install a S33F mutation in β-catenin that blocks β-catenin phosphorylation, impedes β-catenin degradation, and upregulates Wnt signaling. In vitro, base editing installs the S33F mutation with a 200-fold higher editing:indel ratio than HDR. In post-mitotic cells in mouse inner ear, injection of base editor protein:RNA:lipid installs this mutation, resulting in Wnt activation that induces mitosis of cochlear supporting cells and cellular reprogramming. In contrast, injection of HDR agents does not induce Wnt upregulation. These results establish a strategy for modifying posttranslational states in signaling pathways, and an approach to precision editing in post-mitotic tissues.
可编程核酸酶可通过同源定向修复(HDR)将精确的变化引入基因组 DNA。不幸的是,HDR 在很大程度上仅限于有丝分裂细胞,并且通常伴随着过多的随机插入和缺失(indels)。在这里,我们提出了一种体内碱基编辑策略,以解决这些限制。我们使用无核酸酶的碱基编辑在β-连环蛋白中引入 S33F 突变,该突变阻止β-连环蛋白磷酸化,阻碍β-连环蛋白降解,并上调 Wnt 信号。在体外,碱基编辑以比 HDR 高 200 倍的编辑:indel 比安装 S33F 突变。在小鼠内耳的有丝分裂后细胞中,碱基编辑蛋白:RNA:脂质的注射会安装这种突变,导致 Wnt 激活,诱导耳蜗支持细胞有丝分裂和细胞重编程。相比之下,HDR 剂的注射不会诱导 Wnt 的上调。这些结果确立了一种在信号通路中修饰翻译后状态的策略,以及一种在有丝分裂后组织中进行精确编辑的方法。