Department of Biological Sciences, Tokyo Institute of Technology, Tokyo, Japan.
Center for Information Biology, National Institute of Genetics, Shizuoka, Japan.
Environ Microbiol. 2018 Nov;20(11):4170-4183. doi: 10.1111/1462-2920.14420. Epub 2018 Oct 22.
The glacier stonefly Andiperla willinki is the largest metazoan inhabiting the Patagonian glaciers. In this study, we analysed the gut microbiome of the aquatic nymphs by 16S rRNA gene amplicon and metagenomic sequencing. The bacterial gut community was consistently dominated by taxa typical of animal digestive tracts, such as Dysgonomonadaceae and Lachnospiraceae, as well as those generally indigenous to glacier environments, such as Polaromonas. Interestingly, the dominant Polaromonas phylotypes detected in the stonefly gut were almost never detected in the glacier surface habitat. Fluorescence in situ hybridization analysis revealed that the bacterial lineages typical of animal guts colonized the gut wall in a co-aggregated form, while Polaromonas cells were not included in the aggregates. Draft genomes of several dominant bacterial lineages were reconstructed from metagenomic datasets and indicated that the predominant Dysgonomonadaceae bacterium is capable of degrading various polysaccharides derived from host-ingested food, such as algae, and that other dominant bacterial lineages ferment saccharides liberated by the polysaccharide degradation. Our results suggest that the gut bacteria-host association in the glacier stonefly contributes to host nutrition as well as material cycles in the glacier environment.
冰川石蝇 Andiperla willinki 是栖息在巴塔哥尼亚冰川的最大后生动物。在这项研究中,我们通过 16S rRNA 基因扩增子和宏基因组测序分析了水生若虫的肠道微生物组。肠道细菌群落一直由典型的动物消化道的类群主导,如 Dysgonomonadaceae 和 Lachnospiraceae,以及那些通常存在于冰川环境中的类群,如 Polaromonas。有趣的是,在石蝇肠道中检测到的优势 Polaromonas 菌型几乎从未在冰川表面栖息地中检测到。荧光原位杂交分析表明,典型的动物肠道细菌类群以聚集的形式定植在肠壁上,而 Polaromonas 细胞不包含在聚集物中。从宏基因组数据集重建了几个优势细菌类群的草图基因组,表明主要的 Dysgonomonadaceae 细菌能够降解宿主摄入的各种源自藻类等食物的多糖,而其他优势细菌类群则发酵多糖降解产生的糖。我们的结果表明,冰川石蝇的肠道细菌-宿主共生关系有助于宿主营养以及冰川环境中的物质循环。