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发菜的比较蛋白质组学分析揭示了其对不同紫外线-B辐射处理的适应性机制差异。

Comparative proteomic analysis of Nostoc flagelliforme reveals the difference in adaptive mechanism in response to different ultraviolet-B radiation treatments.

作者信息

Shen Shi-Gang, Guo Rong-Jun, Yan Rong-Rong, Wu Yi-Kai, Zhao Dong-Xue, Lin Ya-Hui, Lv He-Xin, Jia Shi-Ru, Han Pei-Pei

机构信息

Key Laboratory of Industrial Fermentation Microbiology, Ministry of Education, State Key Laboratory of Food Nutrition and Safety, College of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, People's Republic of China.

出版信息

Mol Biol Rep. 2018 Dec;45(6):1995-2006. doi: 10.1007/s11033-018-4355-9. Epub 2018 Sep 29.

Abstract

Nostoc flagelliforme is a pioneer organism in the desert and highly resistant to ultraviolet B (UV-B) radiation, while the involved adaptive mechanism has not been fully explored yet. To elucidate the responsive mechanism, two doses of UV-B radiation (low: 1 W/m and high: 5 W/m) were irradiated for 6 h and 48 h, respectively, and their effects on global metabolism in N. flagelliforme were comprehensively investigated. In this study, we used iTRAQ-based proteomic approach to explore the proteomes of N. flagelliforme, and 151, 172, 124 and 148 differentially expressed proteins were identified under low and high UV-B doses for 6 h and 48 h, respectively. Functional classification analysis showed these proteins were mainly involved in photosynthesis, amino acid metabolism, antioxidant activity and carbohydrate metabolism. Further analysis revealed that UV-B imposed restrictions on primary metabolism including photosynthesis, Calvin cycle, and amino acid metabolism, and cells started defense mechanism through repair of DNA and protein damage, increasing antioxidant activity, and accumulating extracellular polysaccharides to minimize the damage. Moreover, high UV-B dose imposed more severe restrictions and activated stronger defense mechanism compared with low dose. The results would improve the understanding of molecular mechanisms of UV-B-stress adaption in N. flagelliforme.

摘要

发菜是沙漠中的先锋生物,对紫外线B(UV-B)辐射具有高度抗性,但其相关的适应机制尚未得到充分探索。为了阐明其响应机制,分别用两种剂量的UV-B辐射(低剂量:1 W/m²和高剂量:5 W/m²)照射6小时和48小时,并全面研究了它们对发菜整体代谢的影响。在本研究中,我们采用基于iTRAQ的蛋白质组学方法来探索发菜的蛋白质组,分别在低剂量和高剂量UV-B照射6小时和48小时的条件下,鉴定出了151、172、124和148个差异表达蛋白。功能分类分析表明,这些蛋白主要参与光合作用、氨基酸代谢、抗氧化活性和碳水化合物代谢。进一步分析发现,UV-B对包括光合作用、卡尔文循环和氨基酸代谢在内的初级代谢施加了限制,细胞通过修复DNA和蛋白质损伤、提高抗氧化活性以及积累胞外多糖来启动防御机制,以尽量减少损伤。此外,与低剂量相比,高剂量UV-B施加的限制更严重,激活的防御机制更强。这些结果将有助于增进对发菜中UV-B胁迫适应分子机制的理解。

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