1School of Life Science, Northeast Agricultural University, Harbin 150030, PR China.
2State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China.
Int J Syst Evol Microbiol. 2018 Dec;68(12):3892-3896. doi: 10.1099/ijsem.0.003085. Epub 2018 Oct 23.
A novel Gram-stain-positive, strictly aerobic strain, NEAU-SA1, which showed a rod-coccus growth life cycle, was isolated from forest soil from Zhangjiajie, Hunan Province, China. The isolate grew at 10-40 °C (optimum 28 °C), at pH 5.0-10.0 (optimum pH 7.0) and in the presence of up to 5 % (w/v) NaCl, although NaCl was not required for growth. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NEAU-SA1 belonged to the genus Arthrobacter and was closely related to Arthrobacter cupressi DSM 24664 (98.1 % similarity). Average nucleotide identity values between NEAU-SA1 and A. cupressi DSM 24664 were 88.91 and 87.41 % by ANIm and ANIb analysis, respectively. The in silico DNA-DNA hybridization value between strain NEAU-SA1 and A. cupressi DSM 24664 was 34.20 %, again indicating they belong to different taxa. The genomic DNA G+C content was 66.74 mol%. The major cellular fatty acids (>10 %) were anteiso-C15 : 0, anteiso-C17 : 0 and iso-C16 : 0. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol and two unidentified glycolipids. The predominant menaquinone was MK-9(H2). The peptidoglycan type was A3α with an interpeptide bridge comprising l-Lys and l-Ala. Glucose, ribose and galactose were the whole-cell sugars. On the basis of morphological, physiological, biochemical and chemotaxonomic analysis, strain NEAU-SA1 was classified as representing a novel species in the genus Arthrobacter, for which the name Arthrobacter silvisoli sp. nov. is proposed. The type strain is NEAU-SA1 (=DSM 106716=CCTCC AB 2017271).
一株新型革兰氏阳性、严格需氧的菌株,NEAU-SA1,具有杆-球菌生长周期,从中国湖南张家界的森林土壤中分离得到。该分离株在 10-40°C(最佳温度 28°C)、pH5.0-10.0(最佳 pH7.0)和高达 5%(w/v)NaCl 的条件下生长,尽管生长不需要 NaCl。基于 16S rRNA 基因序列的系统发育分析表明,菌株 NEAU-SA1 属于节杆菌属,与节杆菌属的节杆菌 DSM 24664(相似度 98.1%)最为密切相关。NEAU-SA1 与 A. cupressi DSM 24664 之间的平均核苷酸同一性值分别通过 ANIm 和 ANIb 分析为 88.91%和 87.41%。菌株 NEAU-SA1 与 A. cupressi DSM 24664 之间的 DNA-DNA 杂交值在 34.20%,再次表明它们属于不同的分类单元。基因组 DNA G+C 含量为 66.74mol%。主要细胞脂肪酸(>10%)为 anteiso-C15:0、anteiso-C17:0 和 iso-C16:0。极性脂类为双磷脂酰甘油、磷脂酰甘油、磷脂酰肌醇和两种未鉴定的糖脂。主要的menaquinone 是 MK-9(H2)。肽聚糖类型为 A3α,具有由 l-Lys 和 l-Ala 组成的interpeptide 桥。全细胞糖为葡萄糖、核糖和半乳糖。基于形态学、生理学、生物化学和化学分类学分析,菌株 NEAU-SA1 被归类为节杆菌属的一个新型种,命名为节杆菌林地亚种。模式菌株为 NEAU-SA1(=DSM 106716=CCTCC AB 2017271)。