Zoological Institute, Russian Academy of Sciences, St. Petersburg, 199034, Russian Federation.
St. Petersburg State University, St. Petersburg, 199034, Russian Federation.
J Eukaryot Microbiol. 2019 Jul;66(4):582-591. doi: 10.1111/jeu.12702. Epub 2018 Dec 9.
Molecular phylogenetic analysis of 18S rRNA gene sequences of nearly any species of Chytridiomycota has typically challenged traditional classification and triggered taxonomic revision. This has often led to the establishment of new taxa which, normally, appears well supported by zoospore ultrastructure, which provides diagnostic characters. To construct a meaningful and comprehensive classification of Chytridiomycota, the combination of molecular phylogenies and morphological studies of traditionally defined chytrid species is needed. In this work, we have studied morphological and ultrastructural features based on light and transmission electron microscopy as well as molecular phylogenetic analysis of a parasite (strain X-124 CCPP ZIN RAS) morphologically similar to Rhizophydium granulosporum living on the yellow-green alga Tribonema gayanum. Phylogenetic analysis of the 18S rRNA gene sequence of this strain supports that it represents a new genus and species affiliated to the recently established order Gromochytriales. The ultrastructure of X-124 confirms its phylogenetic position sister to Gromochytrium and serves as the basis for the description of the new genus and species Apiochytrium granulosporum. The 18S rRNA gene of A. granulosporum contains a S943 group I intron that carries a homing endonuclease pseudogene.
对几近所有的接合菌门物种的 18S rRNA 基因序列进行分子系统发育分析通常会对传统分类提出挑战,并引发分类修订。这通常会导致新分类单元的建立,这些新分类单元通常通过游动孢子超微结构得到很好的支持,而游动孢子超微结构提供了诊断特征。为了对接合菌门进行有意义和全面的分类,需要将分子系统发育与传统定义的接合菌物种的形态研究相结合。在这项工作中,我们研究了形态学和超微结构特征,包括基于光镜和透射电子显微镜的特征,以及对一种寄生虫(菌株 X-124 CCPP ZIN RAS)的分子系统发育分析,该寄生虫在形态上类似于生活在黄-绿藻(Tribonema gayanum)上的 Rhizophydium granulosporum。该菌株的 18S rRNA 基因序列的系统发育分析支持它代表了一个新的属和种,与最近建立的 Gromochytriales 目有关。X-124 的超微结构证实了它与 Gromochytrium 的系统发育位置,并为描述新的属和种 Apiochytrium granulosporum 提供了依据。Apiochytrium granulosporum 的 18S rRNA 基因包含一个 S943 组 I 内含子,其中携带一个归巢内切酶假基因。