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浅水气体喷口定殖过程中硫氧化菌的生态演替

Ecological Succession of Sulfur-Oxidizing - and During Colonization of a Shallow-Water Gas Vent.

作者信息

Patwardhan Sushmita, Foustoukos Dionysis I, Giovannelli Donato, Yücel Mustafa, Vetriani Costantino

机构信息

Department of Marine and Coastal Sciences, Rutgers University, New Brunswick, NJ, United States.

Geophysical Laboratory, Carnegie Institution of Washington, Washington, DC, United States.

出版信息

Front Microbiol. 2018 Dec 6;9:2970. doi: 10.3389/fmicb.2018.02970. eCollection 2018.

Abstract

In this study, we integrated geochemical measurements, microbial diversity surveys and physiological characterization of laboratory strains to investigate substrate-attached filamentous microbial biofilms at Tor Caldara, a shallow-water gas vent in the Tyrrhenian Sea. At this site, the venting gases are mainly composed of CO and HS and the temperature at the emissions is the same as that of the surrounding water. To investigate the composition of the total and active fraction of the Tor Caldara biofilm communities, we collected established and newly formed filaments and we sequenced the 16S rRNA genes (DNA) and the 16S rRNA transcripts (cDNA). Chemoautotrophic sulfur-oxidizing members of the (predominantly ) dominate the active fraction of the established microbial filaments, while (predominantly spp.) are more prevalent in the young filaments. This indicates a succession of the two communities, possibly in response to age, sulfide and oxygen concentrations. Growth experiments with representative laboratory strains in sulfide gradient medium revealed that () grew closer to the sulfide source than sp. (). Overall, our findings show that sulfur-oxidizing are the dominant pioneer colonizers of the Tor Caldara biofilm communities and that become prevalent once the community is established. This succession pattern appears to be driven - among other factors - by the adaptation of - and to different sulfide concentrations.

摘要

在本研究中,我们整合了地球化学测量、微生物多样性调查以及实验室菌株的生理特征分析,以研究第勒尼安海浅水天然气喷口托尔卡尔达拉(Tor Caldara)附着在基质上的丝状微生物生物膜。在该地点,排放的气体主要由一氧化碳和硫化氢组成,排放口的温度与周围海水相同。为了研究托尔卡尔达拉生物膜群落中总群落和活性部分的组成,我们收集了已形成和新形成的丝状菌,并对16S rRNA基因(DNA)和16S rRNA转录本(cDNA)进行了测序。在已形成的微生物丝状体的活性部分中,(主要是)的化学自养型硫氧化成员占主导地位,而(主要是 spp.)在年轻的丝状体中更为普遍。这表明这两个群落存在演替现象,可能是对年龄、硫化物和氧气浓度的响应。在硫化物梯度培养基中对代表性实验室菌株进行的生长实验表明()比 sp.()更靠近硫化物源生长。总体而言,我们的研究结果表明,硫氧化是托尔卡尔达拉生物膜群落的主要先锋定殖者,并且一旦群落建立,就会变得普遍。这种演替模式似乎在其他因素中,是由和对不同硫化物浓度的适应性驱动的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9756/6291522/9e67724d2495/fmicb-09-02970-g001.jpg

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