Wang Weidi, Corominas Roser, Lin Guan Ning
Shanghai Mental Health Center, School of Biomedical Engineering, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Shanghai Key Laboratory of Psychotic Disorders, Shanghai Mental Health Center, Shanghai, China.
Front Genet. 2019 Apr 3;10:258. doi: 10.3389/fgene.2019.00258. eCollection 2019.
Neurodevelopmental and psychiatric disorders are a highly disabling and heterogeneous group of developmental and mental disorders, resulting from complex interactions of genetic and environmental risk factors. The nature of multifactorial traits and the presence of comorbidity and polygenicity in these disorders present challenges in both disease risk identification and clinical diagnoses. The genetic component has been firmly established, but the identification of all the causative variants remains elusive. The development of next-generation sequencing, especially whole exome sequencing (WES), has greatly enriched our knowledge of the precise genetic alterations of human diseases, including brain-related disorders. In particular, the extensive usage of WES in research studies has uncovered the important contribution of mutations (DNMs) to these disorders. Trio and quad familial WES are a particularly useful approach to discover DNMs. Here, we review the major WES studies in neurodevelopmental and psychiatric disorders and summarize how genes hit by discovered DNMs are shared among different disorders. Next, we discuss different integrative approaches utilized to interrogate DNMs and to identify biological pathways that may disrupt brain development and shed light on our understanding of the genetic architecture underlying these disorders. Lastly, we discuss the current state of the transition from WES research to its routine clinical application. This review will assist researchers and clinicians in the interpretation of variants obtained from WES studies, and highlights the need to develop consensus analytical protocols and validated lists of genes appropriate for clinical laboratory analysis, in order to reach the growing demands.
神经发育障碍和精神疾病是一组极具致残性且异质性的发育和精神障碍,由遗传和环境风险因素的复杂相互作用所致。这些疾病中多因素性状的本质以及共病和多基因性的存在,给疾病风险识别和临床诊断都带来了挑战。遗传因素已被确凿证实,但确定所有致病变异仍然困难重重。新一代测序技术的发展,尤其是全外显子组测序(WES),极大地丰富了我们对人类疾病(包括脑部相关疾病)精确基因改变的认识。特别是,WES在研究中的广泛应用揭示了新发突变(DNMs)对这些疾病的重要作用。三联体和四联家系WES是发现DNMs的一种特别有用的方法。在此,我们回顾了神经发育障碍和精神疾病方面的主要WES研究,并总结了不同疾病中被发现DNMs影响的基因是如何共享的。接下来,我们讨论用于探究DNMs以及识别可能扰乱大脑发育的生物学途径的不同整合方法,这些方法有助于我们理解这些疾病背后的遗传结构。最后,我们讨论从WES研究向其常规临床应用转变的现状。本综述将帮助研究人员和临床医生解读从WES研究中获得的变异,并强调需要制定适用于临床实验室分析的共识分析方案和经过验证的基因列表,以满足不断增长的需求。