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新种,从潮滩沉积物中分离得到。

sp. nov., isolated from tidal flat sediment.

作者信息

Jang Hye-Jin, Song Jaeho, Joung Yochan, Cho Jang-Cheon

机构信息

Department of Biological Sciences, Inha University, Incheon 22212, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2019 Sep;69(9):2651-2657. doi: 10.1099/ijsem.0.003499.

Abstract

A Gram-stain-negative, obligately aerobic, cream-coloured, non-gliding, motile with a single polar flagellum and rod-shaped bacterium, designated IMCC34151, was isolated from tidal flat sediment of the Yellow Sea, Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain IMCC34151 belonged to the genus of the family and shared 94.7-96.8 % sequence similarities to species. Whole-genome sequencing of strain IMCC34151 revealed a genome size of 3.2 Mbp and a DNA G+C content of 62.6 mol%. The strain contained summed feature 8 (C 7 and/or C 6), Ccyclo 8 and C as the major fatty acids and ubiquinone-10 (Q-10) as the major respiratory quinone. The polar lipids detected in the strain were phosphatidylglycerol, diphosphatidylglycerol, two unidentified glycolipids and 12 unidentified lipids. On the basis of its phylogenetic and phenotypic characteristics, strain IMCC34151 is considered to represent a novel species of the genus , for which the name sp. nov. (type strain IMCC34151 =KACC 19595=NBRC 113420) is proposed.

摘要

从大韩民国黄海潮滩沉积物中分离出一株革兰氏染色阴性、专性需氧、奶油色、不滑动、具单根极鞭毛且呈杆状的细菌,命名为IMCC34151。基于16S rRNA基因序列的系统发育分析表明,菌株IMCC34151属于 科的 属,与 属物种的序列相似性为94.7-96.8%。菌株IMCC34151的全基因组测序显示基因组大小为3.2 Mbp,DNA G+C含量为62.6 mol%。该菌株以特征性总和8(C7和/或C6)、环C8和C作为主要脂肪酸,以泛醌-10(Q-10)作为主要呼吸醌。在该菌株中检测到的极性脂质为磷脂酰甘油、双磷脂酰甘油、两种未鉴定的糖脂和12种未鉴定的脂质。基于其系统发育和表型特征,菌株IMCC34151被认为代表了 属的一个新物种,为此提出新物种名称 sp. nov.(模式菌株IMCC34151 =KACC 19595=NBRC 113420)。

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