CNRS, Aix Marseille Univ, Centrale Marseille, iSm2, Marseille, France.
BIP, CNRS, Aix Marseille Univ, Marseille, France.
Mol Biotechnol. 2019 Sep;61(9):650-662. doi: 10.1007/s12033-019-00191-5.
1-Aminocyclopropane carboxylic acid oxidase (ACCO) catalyzes the last step of ethylene biosynthesis in plants. Although some sets of structures have been described, there are remaining questions on the active conformation of ACCO and in particular, on the conformation and potential flexibility of the C-terminal part of the enzyme. Several techniques based on the introduction of a probe through chemical modification of amino acid residues have been developed for determining the conformation and dynamics of proteins. Cysteine residues are recognized as convenient targets for selective chemical modification of proteins, thanks to their relatively low abundance in protein sequences and to their well-mastered chemical reactivity. ACCOs have generally 3 or 4 cysteine residues in their sequences. By a combination of approaches including directed mutagenesis, activity screening on cell extracts, biophysical and biochemical characterization of purified enzymes, we evaluated the effect of native cysteine replacement and that of insertion of cysteines on the C-terminal part in tomato ACCO. Moreover, we have chosen to use paramagnetic labels targeting cysteine residues to monitor potential conformational changes by electron paramagnetic resonance (EPR). Given the level of conservation of the cysteines in ACCO from different plants, this work provides an essential basis for the use of cysteine as probe-anchoring residues.
1-氨基环丙烷羧酸氧化酶(ACCO)催化植物中乙烯生物合成的最后一步。尽管已经描述了一些结构,但关于 ACCO 的活性构象,特别是关于酶的 C 末端部分的构象和潜在灵活性,仍然存在一些问题。已经开发了几种基于通过氨基酸残基的化学修饰引入探针的技术,用于确定蛋白质的构象和动力学。由于其在蛋白质序列中的相对低丰度和经过良好掌握的化学反应性,半胱氨酸残基被认为是蛋白质选择性化学修饰的方便靶标。ACCO 通常在其序列中有 3 或 4 个半胱氨酸残基。通过包括定向诱变、细胞提取物上的活性筛选、纯化酶的生物物理和生化特性分析在内的方法组合,我们评估了天然半胱氨酸取代和在番茄 ACCO 的 C 末端插入半胱氨酸对活性的影响。此外,我们选择使用针对半胱氨酸残基的顺磁标记物通过电子顺磁共振(EPR)监测潜在的构象变化。鉴于不同植物的 ACCO 中半胱氨酸的保守程度,这项工作为将半胱氨酸用作探针锚定残基提供了重要基础。