Molecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston, Massachusetts, USA; Institute of New Frontier Stroke Research, Hallym University College of Medicine, Chuncheon, Korea.
Institute of New Frontier Stroke Research, Hallym University College of Medicine, Chuncheon, Korea.
World Neurosurg. 2019 Oct;130:e804-e814. doi: 10.1016/j.wneu.2019.06.228. Epub 2019 Jul 9.
Genome-wide association studies have reported an association between the EDNRA gene and intracranial aneurysm (IA) in European and Japanese populations; however, there is no study on this polymorphism in other Asian populations. Therefore, we performed an extensive large-scale meta-analysis for association of the rs6841581 variant of EDNRA with IA susceptibility in East Asian population.
We conducted a systemic review via electronic search for papers published between January 2002 and February 2019. We used fixed and random effect models and applied the inverse variance method. The statistical power of the result was estimated in the genome-wide significant threshold under an additive inheritance model.
Our meta-analysis included 5873 patients with IA and 14,736 non-IA controls from 6 independent populations: 4 Japanese, 1 Chinese, and 1 Korean. The risk (major) G allele of rs6841581 showed the highest significant association with the increased risk of IA under the fixed effect model in the East-Asian population (odds ratio = 1.244, 95% confidence interval: 1.174-1.318, P = 1.36E-13). The rs6841581 variant showed sufficient statistical power (80.3%) in this meta-analysis under the additive model. In subsequent analysis, the frequencies of the risk G allele showed similar pattern in all of the Japanese, Chinese, and Korean populations (69%, 80%, and 78%, respectively). In the in silico functional analysis, none of the functional variants was correlated with rs6841581.
The genetic variant of EDNRA, rs6841581, was significantly associated with increased risk of IA. Our findings indicate that it could be used as an IA-predicting variant in East Asian populations.
全基因组关联研究已经在欧洲和日本人群中报道了 EDNRA 基因与颅内动脉瘤(IA)之间的关联;然而,在其他亚洲人群中尚未对此多态性进行研究。因此,我们在东亚人群中进行了一项广泛的大规模荟萃分析,以研究 EDNRA 基因的 rs6841581 变体与 IA 易感性的关系。
我们通过电子搜索进行了系统综述,以检索 2002 年 1 月至 2019 年 2 月期间发表的论文。我们使用固定效应模型和随机效应模型,并应用逆方差法。在加性遗传模型下,根据全基因组显著阈值估计结果的统计功效。
我们的荟萃分析包括来自 6 个独立人群的 5873 名 IA 患者和 14736 名非 IA 对照:4 名日本人、1 名中国人和 1 名韩国人。rs6841581 的风险(主要)G 等位基因在东亚人群中,使用固定效应模型显示与 IA 风险增加具有最高显著相关性(优势比=1.244,95%置信区间:1.174-1.318,P=1.36E-13)。在加性模型下,该 rs6841581 变体在本荟萃分析中具有足够的统计功效(80.3%)。在随后的分析中,所有日本人、中国人和韩国人中的风险 G 等位基因频率均呈现出相似的模式(分别为 69%、80%和 78%)。在计算机功能分析中,没有功能变体与 rs6841581 相关。
EDNRA 基因的遗传变异 rs6841581 与 IA 风险增加显著相关。我们的研究结果表明,它可以作为东亚人群中预测 IA 的变异。