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也门萨那 Al Thawra 大学医院耐碳青霉烯肠杆菌科临床分离株的特征。

Characterization of Carbapenem-Resistant Enterobacteriaceae Clinical Isolates in Al Thawra University Hospital, Sana'a, Yemen.

机构信息

Laboratoire d'Ecologie Microbienne, FSNV, Université de Bejaia, Bejaia, Algérie.

Department of Microbiology, Al Thawra University Hospital, Sana'a, Yemen.

出版信息

Microb Drug Resist. 2020 Mar;26(3):211-217. doi: 10.1089/mdr.2018.0443. Epub 2019 Aug 9.

Abstract

The aim of this study was to investigate the resistance mechanisms of carbapenem-resistant Enterobacteriaceae clinical strains recovered from Al Thawra University Hospital, Sana'a, Yemen. A total of 27 isolates showing decreased susceptibility to carbapenems were obtained from different clinical specimens in Al Thawra Hospital, Sana'a, Yemen. Strains were identified by Matrix Assisted Laser Desorption Ionization Time-Of-Flight spectroscopy. Susceptibility to antibiotics was determined by the disk diffusion method on Mueller Hinton agar. Carbapenemases-encoding genes, extended-spectrum β-lactamases (ESBLs), and plasmid-mediated quinolone resistance (PMQR) genes were screened by PCR. Bacterial isolates were typed by multilocus sequence typing (MLST). Carbapenemase genes detection and sequencing showed that 18 (66.7%) isolates were (NDM-1,  = 13; NDM-1 + OXA-48,  = 3; OXA-48,  = 1; OXA-232,  = 1), 6 (22.2%) were (NDM-5,  = 3; OXA-181,  = 2; OXA-48,  = 1), and 3 (11.1%) were (NDM-1,  = 1; OXA-181,  = 2). In addition the ESBL gene was detected in 14 and 2 isolates, and the was found in 1 isolate. Fifteen isolates were PMQR positive including ( = 1), ( = 5), ( = 2), and ( = 7). The MLST typing showed a diversity of sequence type (ST) clones including ST410 (3), ST448 (2), and ST648; ST78 and ST270; and ST395 (2), ST309, ST23, ST35, ST1728, ST15, ST231, and ST1428. This study reports the first description of OXA-48-like-producing Enterobacteriaceae and NDM-5 enzymes in in Yemen.

摘要

本研究旨在探讨也门萨那的 Al Thawra 大学医院分离的耐碳青霉烯肠杆菌临床株的耐药机制。从也门萨那的 Al Thawra 医院的不同临床标本中获得了总共 27 株对碳青霉烯类药物敏感性降低的分离株。通过基质辅助激光解吸电离飞行时间光谱鉴定菌株。抗生素敏感性通过 Mueller Hinton 琼脂上的圆盘扩散法确定。通过 PCR 筛选碳青霉烯酶编码基因、扩展谱β-内酰胺酶 (ESBL) 和质粒介导的喹诺酮耐药 (PMQR) 基因。通过多位点序列分型 (MLST) 对细菌分离株进行分型。碳青霉烯酶基因检测和测序显示,18 株 (66.7%)为 (NDM-1,13 株;NDM-1+OXA-48,3 株;OXA-48,1 株);6 株 (22.2%)为 (NDM-5,3 株;OXA-181,2 株;OXA-48,1 株);3 株 (11.1%)为 (NDM-1,1 株;OXA-181,2 株)。此外,在 14 株和 2 株中检测到 ESBL 基因,在 1 株中检测到 基因。15 株为 PMQR 阳性,包括 (3 株)、 (5 株)、 (2 株)和 (7 株)。MLST 分型显示出多样性的序列型 (ST) 克隆,包括 ST410 (3 株)、ST448 (2 株)和 ST648;ST78 和 ST270;以及 ST395 (2 株)、ST309、ST23、ST35、ST1728、ST15、ST231 和 ST1428。本研究首次报道了也门产 OXA-48 样肠杆菌科和 NDM-5 酶。

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