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灌注生物反应器中肝球体代谢反应的数值研究

Numerical Investigations of Hepatic Spheroids Metabolic Reactions in a Perfusion Bioreactor.

作者信息

Sharifi Fatemeh, Firoozabadi Bahar, Firoozbakhsh Keikhosrow

机构信息

School of Mechanical Engineering, Sharif University of Technology, Tehran, Iran.

出版信息

Front Bioeng Biotechnol. 2019 Sep 12;7:221. doi: 10.3389/fbioe.2019.00221. eCollection 2019.

Abstract

Miniaturized culture systems of hepatic cells are emerging as a strong tool facilitating studies related to liver diseases and drug discovery. However, the experimental optimization of various parameters involved in the operation of these systems is time-consuming and expensive. Hence, developing numerical tools predicting the function of such systems can significantly reduce the associated cost. In this paper, a perfusion-based three dimensional (3D) bioreactor comprising encapsulated human liver hepatocellular carcinoma (HepG2) spheroids are analyzed. The flow and mass transfer equations for oxygen as well as different metabolites such as albumin, glucose, glutamine, ammonia, and urea were solved in three different domains, i.e., free flow, hydrogel, and spheroid porous media sections. Since the spheroids were encapsulated inside the hydrogel, shear stress imposed on them were found to be less than tolerable thresholds. The predicted cumulative albumin concentration over the 7 days of culture period showed a good agreement with the experimental data. Based on the critical role of oxygen supply to the hepatocytes, a parametric study was performed and the effect of various parameters was investigated. Results illustrated that convection mechanism was the dominant transport mechanism in the main-stream section contrary to the intra spheroids parts where the diffusion was the prevailing transport mechanism. In the hydrogel parts, the rate of diffusion and convection mechanisms were almost identical. As expected, higher perfusion rate would provide high oxygen level for the cells and, smaller spheroids with a diameter of 100 μm were at the low risk of hypoxic conditions due to short diffusive oxygen penetration depth. Numerical results evidenced that spheroids with diameter size >200 μm at low porosities (ε = 0.2-0.3) were at risk of oxygen depletion, especially at locations near the core center. Therefore, these results could be beneficial in preventing hypoxic conditions during experiments. The presented numerical model provides a numerical platform which can help researchers to design and optimize complex bioreactors and obtain numerical indexes of the main metabolites in a very short time prior to any fabrications. Such numerical indexes can be helpful in certifying the outcomes of forensic investigations.

摘要

肝细胞的小型化培养系统正逐渐成为一种强大的工具,有助于开展与肝脏疾病和药物发现相关的研究。然而,对这些系统运行中涉及的各种参数进行实验优化既耗时又昂贵。因此,开发能够预测此类系统功能的数值工具可显著降低相关成本。本文分析了一种基于灌注的三维(3D)生物反应器,该反应器包含封装的人肝脏肝癌(HepG2)球体。在三个不同区域,即自由流动区域、水凝胶区域和球体多孔介质区域,求解了氧气以及白蛋白、葡萄糖、谷氨酰胺、氨和尿素等不同代谢物的流动和传质方程。由于球体被封装在水凝胶内部,发现施加在它们上面的剪切应力小于可耐受阈值。预测的培养7天期间的累积白蛋白浓度与实验数据显示出良好的一致性。基于氧气供应对肝细胞的关键作用,进行了参数研究并考察了各种参数的影响。结果表明,对流机制是主流区域的主要传输机制,而在球体内部,扩散是主要的传输机制。在水凝胶区域,扩散和对流机制的速率几乎相同。正如预期的那样,较高的灌注速率将为细胞提供高氧水平,并且直径为100μm的较小球体由于氧气扩散穿透深度短,处于低缺氧风险状态。数值结果证明,低孔隙率(ε = 0.2 - 0.3)下直径尺寸>200μm的球体存在氧气耗尽风险,尤其是在靠近核心中心的位置。因此,这些结果有助于在实验过程中预防缺氧情况。所提出的数值模型提供了一个数值平台,可帮助研究人员在任何制造之前的很短时间内设计和优化复杂的生物反应器,并获得主要代谢物的数值指标。此类数值指标有助于验证法医调查的结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db6c/6751279/31ac5ec1a216/fbioe-07-00221-g0001.jpg

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