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硫醇配体铁非血红素配合物与半胱氨酸双加氧酶的光谱和计算比较:第二配位层对底物(类似物)定位的影响。

Spectroscopic and Computational Comparisons of Thiolate-Ligated Ferric Nonheme Complexes to Cysteine Dioxygenase: Second-Sphere Effects on Substrate (Analogue) Positioning.

机构信息

Department of Chemistry , Marquette University , Milwaukee , Wisconsin 53201 , United States.

Department of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.

出版信息

Inorg Chem. 2019 Dec 16;58(24):16487-16499. doi: 10.1021/acs.inorgchem.9b02432. Epub 2019 Dec 2.

Abstract

Parallel spectroscopic and computational studies of iron(III) cysteine dioxygenase (CDO) and synthetic models are presented. The synthetic complexes utilize the ligand tris(4,5-diphenyl-1-methylimidazol-2-yl)phosphine (TIP), which mimics the facial three-histidine triad of CDO and other thiol dioxygenases. In addition to the previously reported [Fe(CysOEt)(TIP)]BPh (; CysOEt is the ethyl ester of anionic l-cysteine), the formation and crystallographic characterization of [Fe(2-MTS)(TIP)]BPh () is reported, where the methyl 2-thiosalicylate anion (2-MTS) resembles the substrate of 3-mercaptopropionate dioxygenase (MDO). One-electron chemical oxidation of and yields ferric species that bind cyanide and azide anions, which have been used as spectroscopic probes of O binding in prior studies of Fe-CDO. The six-coordinate Fe-CN and Fe-N adducts are examined with UV-vis absorption, electron paramagnetic resonance (EPR), and resonance Raman (rRaman) spectroscopies. In addition, UV-vis and rRaman studies of cysteine- and cyanide-bound Fe-CDO are reported for both the wild-type (WT) enzyme and C93G variant, which lacks the Cys-Tyr cross-link that is present in the second coordination sphere of the WT active site. Density functional theory (DFT) and ab initio calculations are employed to provide geometric and electronic structure descriptions of the synthetic and enzymatic Fe adducts. In particular, it is shown that the complete active space self-consistent field (CASSCF) method, in tandem with -electron valence state second-order perturbation theory (NEVPT2), is capable of elucidating the structural basis of subtle shifts in EPR values for low-spin Fe species.

摘要

呈现了铁(III)半胱氨酸双加氧酶(CDO)和合成模型的平行光谱和计算研究。合成配合物利用配体三(4,5-二苯基-1-甲基咪唑-2-基)膦(TIP),模拟 CDO 和其他硫醇双加氧酶的面三组氨酸三联体。除了先前报道的 [Fe(CysOEt)(TIP)]BPh (CysOEt 是阴离子 l-半胱氨酸的乙酯)之外,还报道了 [Fe(2-MTS)(TIP)]BPh 的形成和晶体学表征,其中甲基 2-硫代水杨酸阴离子(2-MTS)类似于 3-巯基丙酸盐双加氧酶(MDO)的底物。和 的单电子化学氧化生成与氰化物和叠氮化物阴离子结合的三价铁物种,这些阴离子曾在之前的 Fe-CD0 研究中用作 O 结合的光谱探针。用紫外可见吸收光谱、电子顺磁共振(EPR)和共振拉曼(rRaman)光谱研究六配位 Fe-CN 和 Fe-N 加合物。此外,还报道了野生型(WT)酶和缺乏存在于 WT 活性位点第二配位球中的 Cys-Tyr 交联的 C93G 变体的半胱氨酸和氰化物结合的 Fe-CD0 的 UV-vis 和 rRaman 研究。密度泛函理论(DFT)和从头算计算用于提供合成和酶促 Fe 加合物的几何和电子结构描述。特别是,表明完整的活性空间自洽场(CASSCF)方法与 -电子价态二级微扰理论(NEVPT2)相结合,能够阐明低自旋 Fe 物种的 EPR 值细微变化的结构基础。

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