Department of Food Science, University of Tennessee, Knoxville, TN 37996, USA.
Viruses. 2019 Dec 17;11(12):1166. doi: 10.3390/v11121166.
phage LP-018 is the only phage from a diverse collection of 120 phages able to form plaques on a phage-resistant strain lacking rhamnose in its cell wall teichoic acids. The aim of this study was to characterize phage LP-018 and to identify what types of mutations can confer resistance to LP-018. Whole genome sequencing and transmission electron microscopy revealed LP-018 to be a member of the genus. One-step-growth curve analysis of LP-018 revealed an eclipse period of ~60-90 min and a burst size of ~2 PFU per infected cell. Despite slow growth and small burst size, LP-018 can inhibit the growth of at a high multiplicity of infection. Ten distinct LP-018-resistant mutants were isolated from infected 10403S and characterized by whole genome sequencing. In each mutant, a single mutation was identified in either the LMRG_00278 or LMRG_01613 encoding genes. Interesting, LP-018 was able to bind to a representative phage-resistant mutant with a mutation in each gene, suggesting these mutations confer resistance through a mechanism independent of adsorption inhibition. Despite forming plaques on the rhamnose deficient 10403S mutant, LP-018 showed reduced binding efficiency, and we did not observe inhibition of the strain under the conditions tested. Two mutants of LP-018 were also isolated and characterized, one with a single SNP in a gene encoding a BppU domain protein that likely alters its host range. LP-018 is shown to be a unique phage that, with additional evaluation, may be useful in biocontrol applications that aim to reduce the emergence of phage resistance.
噬菌体 LP-018 是从一个多样化的 120 噬菌体集合中分离出来的唯一一种噬菌体,能够在缺乏细胞壁磷壁酸中鼠李糖的噬菌体抗性菌株上形成噬菌斑。本研究的目的是表征噬菌体 LP-018 并确定哪些类型的突变可以赋予对 LP-018 的抗性。全基因组测序和透射电子显微镜显示 LP-018 是 属的一个成员。LP-018 的一步生长曲线分析显示,潜伏期约为 60-90 分钟,爆发量约为每个感染细胞 2 个 PFU。尽管生长缓慢且爆发量小,但 LP-018 可以在高感染复数下抑制 的生长。从感染的 10403S 中分离出 10 个不同的 LP-018 抗性突变体,并通过全基因组测序进行了表征。在每个突变体中,在编码基因 LMRG_00278 或 LMRG_01613 中仅发现一个突变。有趣的是,LP-018 能够与每个基因都有突变的代表性噬菌体抗性突变体结合,这表明这些突变通过与吸附抑制无关的机制赋予了抗性。尽管 LP-018 能够在缺乏鼠李糖的 10403S 突变体上形成噬菌斑,但它的结合效率降低,并且在测试条件下未观察到对该菌株的抑制。还分离和表征了 LP-018 的两个突变体,其中一个突变体在编码 BppU 结构域蛋白的基因中只有一个 SNP,这可能改变了它的宿主范围。LP-018 是一种独特的噬菌体,经过进一步评估,可能有助于减少噬菌体抗性出现的生物防治应用。