Soil and Water Sciences Department, University of Florida, Gainesville, FL, USA.
Department of Geological Sciences, University of Florida, 241 Williamson Hall, PO Box 112120, Gainesville, FL, 32611, USA.
Microb Ecol. 2021 Jul;82(1):188-201. doi: 10.1007/s00248-020-01483-z. Epub 2020 Jan 15.
Despite their importance for global biogeochemical cycles and carbon sequestration, the microbiome of tropical peatlands remains under-determined. Microbial interactions within peatlands can regulate greenhouse gas production, organic matter turnover, and nutrient cycling. Here we analyze bacterial and fungal communities along a steep P gradient in a tropical peat dome and investigate community level traits and network analyses to better understand the composition and potential interactions of microorganisms in these understudied systems and their relationship to peatland biogeochemistry. We found that both bacterial and fungal community compositions were significantly different along the P gradient, and that the low-P bog plain was characterized by distinct fungal and bacterial families. At low P, the dominant fungal families were cosmopolitan parasites and endophytes, including Clavicipitaceae (19%) in shallow soils (0-4 cm), Hypocreaceae (50%) in intermediate-depth soils (4-8 cm), and Chaetothyriaceae (45%) in deep soils (24-30 cm). In contrast, high- and intermediate-P sites were dominated by saprotrophic families at all depths. Bacterial communities were consistently dominated by the acidophilic Koribacteraceae family, with the exception of the low-P bog site, which was dominated by Acetobacteraceae (19%) and Syntrophaceae (11%). These two families, as well as Rhodospirillaceae, Syntrophobacteraceae, Syntrophorhabdaceae, Spirochaetaceae, and Methylococcaceae appeared within low-P bacterial networks, suggesting the presence of a syntrophic-methanogenic consortium in these soils. Further investigation into the active microbial communities at these sites, when paired with CH and CO gas exchange, and the quantification of metabolic intermediates will validate these potential interactions and provide insight into microbially driven biogeochemical cycling within these globally important tropical peatlands.
尽管热带泥炭地微生物组对全球生物地球化学循环和碳固存至关重要,但它们的情况仍未得到充分确定。泥炭地中的微生物相互作用可以调节温室气体的产生、有机质的转化和养分循环。在这里,我们分析了热带泥炭穹顶中沿陡峭 P 梯度的细菌和真菌群落,并进行了群落水平特征和网络分析,以更好地了解这些研究较少的系统中微生物的组成和潜在相互作用及其与泥炭地生物地球化学的关系。我们发现,沿 P 梯度,细菌和真菌群落组成都有显著差异,低 P 沼泽平原的特征是具有独特的真菌和细菌科。在低 P 条件下,占主导地位的真菌科是世界性的寄生虫和内生真菌,包括浅土(0-4cm)中的 Clavicipitaceae(19%)、中深土(4-8cm)中的 Hypocreaceae(50%)和深土(24-30cm)中的 Chaetothyriaceae(45%)。相比之下,高 P 和中 P 位点在所有深度都以腐生真菌科为主。细菌群落始终以嗜酸的 Koribacteraceae 科为主,除了低 P 沼泽位点,该位点以 Acetobacteraceae(19%)和 Syntrophaceae(11%)为主。这两个科以及 Rhodospirillaceae、Syntrophobacteraceae、Syntrophorhabdaceae、Spirochaetaceae 和 Methylococcaceae 出现在低 P 细菌网络中,表明这些土壤中存在产甲烷的共生体。当与 CH 和 CO 气体交换以及代谢中间产物的定量结合进一步研究这些位点的活性微生物群落时,将验证这些潜在的相互作用,并深入了解这些在全球重要的热带泥炭地中微生物驱动的生物地球化学循环。