Karlsson Edvin, Johansson Anna-Mia, Ahlinder Jon, Lundkvist Moa J, Singh Navinder J, Brodin Tomas, Forsman Mats, Stenberg Per
Department of Molecular Biology, Umeå University, Umeå, Sweden.
Department of Biological Agents, Division of CBRN Defense and Security, Swedish Defense Research Agency, Umeå, Sweden.
PeerJ. 2020 Jan 27;8:e8424. doi: 10.7717/peerj.8424. eCollection 2020.
Microorganisms are essential constituents of ecosystems. To improve our understanding of how various factors shape microbial diversity and composition in nature it is important to study how microorganisms vary in space and time. Factors shaping microbial communities in ground level air have been surveyed in a limited number of studies, indicating that geographic location, season and local climate influence the microbial communities. However, few have surveyed more than one location, at high latitude or continuously over more than a year. We surveyed the airborne microbial communities over two full consecutive years in Kiruna, in the Arctic boreal zone, and Ljungbyhed, in the Southern nemoral zone of Sweden, by using a unique collection of archived air filters. We mapped both geographic and seasonal differences in bacterial and fungal communities and evaluated environmental factors that may contribute to these differences and found that location, season and weather influence the airborne communities. Location had stronger influence on the bacterial community composition compared to season, while location and season had equal influence on the fungal community composition. However, the airborne bacterial and fungal diversity showed overall the same trend over the seasons, regardless of location, with a peak during the warmer parts of the year, except for the fungal seasonal trend in Ljungbyhed, which fluctuated more within season. Interestingly, the diversity and evenness of the airborne communities were generally lower in Ljungbyhed. In addition, both bacterial and fungal communities varied significantly within and between locations, where orders like Rhizobiales, Rhodospirillales and Agaricales dominated in Kiruna, whereas Bacillales, Clostridiales and Sordariales dominated in Ljungbyhed. These differences are a likely reflection of the landscape surrounding the sampling sites where the landscape in Ljungbyhed is more homogenous and predominantly characterized by artificial and agricultural surroundings. Our results further indicate that local landscape, as well as seasonal variation, shapes microbial communities in air.
微生物是生态系统的重要组成部分。为了更好地理解各种因素如何塑造自然界中微生物的多样性和组成,研究微生物在空间和时间上的变化非常重要。在为数不多的研究中,已经对影响地面空气中微生物群落的因素进行了调查,结果表明地理位置、季节和当地气候会影响微生物群落。然而,很少有研究在高纬度地区对多个地点进行调查,或者连续一年以上进行持续调查。我们利用一批独特的存档空气过滤器,对北极寒温带地区的基律纳和瑞典南部温带地区的林格比赫德连续两年的空气传播微生物群落进行了调查。我们绘制了细菌和真菌群落的地理和季节差异图,并评估了可能导致这些差异的环境因素,发现地理位置、季节和天气会影响空气传播群落。与季节相比,地理位置对细菌群落组成的影响更大,而地理位置和季节对真菌群落组成的影响相当。然而,无论地理位置如何,空气传播的细菌和真菌多样性在整个季节总体上呈现相同的趋势,在一年中较温暖的时期达到峰值,但林格比赫德的真菌季节趋势在季节内波动更大。有趣的是,林格比赫德空气传播群落的多样性和均匀度通常较低。此外,细菌和真菌群落在不同地点内部和之间都有显著差异,其中根瘤菌目、红螺菌目和伞菌目在基律纳占主导地位,而芽孢杆菌目、梭菌目和粪壳菌目在林格比赫德占主导地位。这些差异很可能反映了采样地点周围的景观,林格比赫德的景观更加同质化,主要以人工和农业环境为特征。我们的结果进一步表明,当地景观以及季节变化会塑造空气中的微生物群落。