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DNA 和 RNA G-四链体的调控和功能。

The regulation and functions of DNA and RNA G-quadruplexes.

机构信息

Cancer Research UK Cambridge Institute, Li Ka Shing Centre, Cambridge, UK.

Department of Chemistry, University of Cambridge, Cambridge, UK.

出版信息

Nat Rev Mol Cell Biol. 2020 Aug;21(8):459-474. doi: 10.1038/s41580-020-0236-x. Epub 2020 Apr 20.

Abstract

DNA and RNA can adopt various secondary structures. Four-stranded G-quadruplex (G4) structures form through self-recognition of guanines into stacked tetrads, and considerable biophysical and structural evidence exists for G4 formation in vitro. Computational studies and sequencing methods have revealed the prevalence of G4 sequence motifs at gene regulatory regions in various genomes, including in humans. Experiments using chemical, molecular and cell biology methods have demonstrated that G4s exist in chromatin DNA and in RNA, and have linked G4 formation with key biological processes ranging from transcription and translation to genome instability and cancer. In this Review, we first discuss the identification of G4s and evidence for their formation in cells using chemical biology, imaging and genomic technologies. We then discuss possible functions of DNA G4s and their interacting proteins, particularly in transcription, telomere biology and genome instability. Roles of RNA G4s in RNA biology, especially in translation, are also discussed. Furthermore, we consider the emerging relationships of G4s with chromatin and with RNA modifications. Finally, we discuss the connection between G4 formation and synthetic lethality in cancer cells, and recent progress towards considering G4s as therapeutic targets in human diseases.

摘要

DNA 和 RNA 可以采用各种二级结构。四链体 G-四链体 (G4) 结构通过自身识别鸟嘌呤形成堆叠的四联体,并且在体外存在大量 G4 形成的生物物理和结构证据。计算研究和测序方法已经揭示了 G4 序列基序在各种基因组(包括人类基因组)的基因调控区域中的普遍性。使用化学、分子和细胞生物学方法的实验已经证明 G4 存在于染色质 DNA 和 RNA 中,并将 G4 的形成与从转录和翻译到基因组不稳定性和癌症的关键生物学过程联系起来。在这篇综述中,我们首先讨论使用化学生物学、成像和基因组技术鉴定 G4 及其在细胞中形成的证据。然后,我们讨论了 DNA G4 及其相互作用蛋白的可能功能,特别是在转录、端粒生物学和基因组不稳定性方面。还讨论了 RNA G4 在 RNA 生物学中的作用,特别是在翻译中。此外,我们还考虑了 G4 与染色质和 RNA 修饰之间的新兴关系。最后,我们讨论了 G4 形成与癌细胞中合成致死性的关系,以及最近将 G4 作为人类疾病治疗靶点的进展。

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