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探究FreeSurfer手动编辑程序在儿科人群阅读网络研究中的附加价值。

Investigating the Added Value of FreeSurfer's Manual Editing Procedure for the Study of the Reading Network in a Pediatric Population.

作者信息

Beelen Caroline, Phan Thanh Vân, Wouters Jan, Ghesquière Pol, Vandermosten Maaike

机构信息

Parenting and Special Education Research Unit, Faculty of Psychology and Educational Sciences, KU Leuven, Leuven, Belgium.

Icometrix Company, Leuven, Belgium.

出版信息

Front Hum Neurosci. 2020 Apr 24;14:143. doi: 10.3389/fnhum.2020.00143. eCollection 2020.

Abstract

Insights into brain anatomy are important for the early detection of neurodevelopmental disorders, such as dyslexia. FreeSurfer is one of the most frequently applied automatized software tools to study brain morphology. However, quality control of the outcomes provided by FreeSurfer is often ignored and could lead to wrong statistical inferences. Additional manual editing of the data may be a solution, although not without a cost in time and resources. Past research in adults on comparing the automatized method of FreeSurfer with and without additional manual editing indicated that although editing may lead to significant differences in morphological measures between the methods in some regions, it does not substantially change the sensitivity to detect clinical differences. Given that automated approaches are more likely to fail in pediatric-and inherently more noisy-data, we investigated in the current study whether FreeSurfer can be applied fully automatically or additional manual edits of T1-images are needed in a pediatric sample. Specifically, cortical thickness and surface area measures with and without additional manual edits were compared in six regions of interest (ROIs) of the reading network in 5-to-6-year-old children with and without dyslexia. Results revealed that additional editing leads to statistical differences in the morphological measures, but that these differences are consistent across subjects and that the sensitivity to reveal statistical differences in the morphological measures between children with and without dyslexia is not affected, even though conclusions of marginally significant findings can differ depending on the method used. Thereby, our results indicate that additional manual editing of reading-related regions in FreeSurfer has limited gain for pediatric samples.

摘要

深入了解脑解剖结构对于早期发现神经发育障碍(如诵读困难)非常重要。FreeSurfer是研究脑形态学最常用的自动化软件工具之一。然而,FreeSurfer提供的结果的质量控制常常被忽视,这可能导致错误的统计推断。对数据进行额外的人工编辑可能是一种解决方案,尽管这会耗费时间和资源。过去针对成年人比较有无额外人工编辑的FreeSurfer自动化方法的研究表明,虽然编辑可能会导致某些区域的形态学测量在方法之间存在显著差异,但它并不会实质性地改变检测临床差异的敏感性。鉴于自动化方法在儿科数据(本质上噪声更大)中更有可能失败,我们在当前研究中调查了在儿科样本中FreeSurfer是否可以完全自动应用,或者是否需要对T1图像进行额外的人工编辑。具体而言,我们比较了5至6岁有诵读困难和无诵读困难儿童阅读网络的六个感兴趣区域(ROI)在有无额外人工编辑情况下的皮质厚度和表面积测量值。结果显示,额外编辑会导致形态学测量出现统计差异,但这些差异在各受试者之间是一致的,并且揭示有诵读困难和无诵读困难儿童之间形态学测量统计差异的敏感性不受影响,尽管根据所使用的方法,边缘显著结果的结论可能会有所不同。因此,我们的结果表明,对FreeSurfer中与阅读相关区域进行额外的人工编辑对儿科样本的益处有限。

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